SCOPe 2.08: Domain d6p3qa1: 6p3q A:4-343

Lineage for d6p3qa1 (6p3q A:4-343)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.3: Cysteine proteinases [54000] (1 superfamily)
   consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn

4. Superfamily d.3.1: Cysteine proteinases [54001] (24 families)
   the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet

5. Family d.3.1.0: automated matches [191342] (1 protein)
   not a true family

6. Protein automated matches [190230] (23 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187072] (53 PDB entries)

8. Domain d6p3qa1: 6p3q A:4-343 [379909]
   Other proteins in same PDB: d6p3qa2, d6p3qb2
   automated match to d1tl9a_

Details for d6p3qa1

PDB Entry: 6p3q, 2.8 Å

PDB Description: calpain-5 (capn5) protease core (pc)

PDB Compounds: (A:) Calpain-5

SCOPe Domain Sequences for d6p3qa1:

Sequence, based on SEQRES records:

>d6p3qa1 d.3.1.0 (A:4-343) automated matches {Human (Homo sapiens) [TaxId: 9606]}
cvkpyedqnysalrrdcrrrkvlfedplfpatddslyykgtpgpavrwkrpkgicedprl
fvdgisshdlhqgqvgncwfvaacsslasreslwqkvipdwkeqewdpekpnayagifhf
hfwrfgewvdvviddrlptvnnqliychsnsrnefwcalvekayaklagcyqaldggnta
dalvdftggvsepidltegdfandetkrnqlfermlkvhsrgglisasikavtaadmear
lacglvkghayavtdvrkvrlghgllaffksekldmirlrnpwgerewngpwsdtseewq
kvskserekmgvtvqddgefwmtfedvcryftdiikcrvi

Sequence, based on observed residues (ATOM records):

>d6p3qa1 d.3.1.0 (A:4-343) automated matches {Human (Homo sapiens) [TaxId: 9606]}
cvkpyedqnysalrrdcrrrkvlfedplfpatddslyykgtpgpavrwkrpkgicedprl
fvdgishdlhqgqvgncwfvaacsslasreslwqkvipdwkeqewdpekpnayagifhfh
fwrfgewvdvviddrlptvnnqliychsnsrnefwcalvekayaklagcyqaldggntad
alvdftggvsepidltegdfandetkrnqlfermlkvhsrgglisasikavtaadmearl
acglvkghayavtdvrkvrlghgllaffksekldmirlrnpwgerewngpwsdtseewqk
vskserekmgvtvqddgefwmtfedvcryftdiikcrvi

Timeline for d6p3qa1:

• d6p3qa1 first appeared in SCOPe 2.07