PDB entry 6p06
View 6p06 on RCSB PDB site
Description: Ternary structure of the E52D mutant of ANT-4 with Neomycin and AMPCPP
Class: transferase/antibiotic
Keywords: Aminoglycoside nucelotidyl transferase (ANT), Aminoglycoside modifying enzymes (AGMEs), DNA polymerase, ANTIBIOTIC, TRANSFERASE-ANTIBIOTIC complex
Deposited on
2019-05-16, released
2020-01-29
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-05-20, with a file datestamp of
2020-05-15.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.25
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: kanamycin nucleotidyltransferase
Species: Bacillus sp. [TaxId:1409]
Gene: knt, kan
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6p06a1, d6p06a2 - Chain 'B':
Compound: kanamycin nucleotidyltransferase
Species: Bacillus sp. [TaxId:1409]
Gene: knt, kan
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6p06b1, d6p06b2 - Heterogens: APC, CA, NMY, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6p06A (A:)
gshmngpiimtreermkivheikerildkygddvkaigvygslgrqtdgpysdidmmcvm
steeaefshewttgewkvevnfdseeilldyasqvesdwplthgqffsilpiydsggyle
kvyqtaksveaqkfhdaicaliveelfeyagkwrnirvqgpttflpsltvqvamagamli
glhhricyttsasvlteavkqsdlpsgydhlcqfvmsgqlsdseklleslenfwngiqew
terhgyivdvskripf
Sequence, based on observed residues (ATOM records): (download)
>6p06A (A:)
mngpiimtreermkivheikerildkygddvkaigvygslgrqtdgpysdidmmcvmste
eaefshewttgewkvevnfdseeilldyasqvesdwplthgqffsilpiydsggylekvy
qtaksveaqkfhdaicaliveelfeyagkwrnirvqgpttflpsltvqvamagamliglh
hricyttsasvlteavkqsdlpsgydhlcqfvmsgqlsdseklleslenfwngiqewter
hgyivdvskripf
- Chain 'B':
Sequence, based on SEQRES records: (download)
>6p06B (B:)
gshmngpiimtreermkivheikerildkygddvkaigvygslgrqtdgpysdidmmcvm
steeaefshewttgewkvevnfdseeilldyasqvesdwplthgqffsilpiydsggyle
kvyqtaksveaqkfhdaicaliveelfeyagkwrnirvqgpttflpsltvqvamagamli
glhhricyttsasvlteavkqsdlpsgydhlcqfvmsgqlsdseklleslenfwngiqew
terhgyivdvskripf
Sequence, based on observed residues (ATOM records): (download)
>6p06B (B:)
ngpiimtreermkivheikerildkygddvkaigvygslgrqtdgpysdidmmcvmstee
aefshewttgewkvevnfdseeilldyasqvesdwplthgqffsilpiydsggylekvyq
taksveaqkfhdaicaliveelfeyagkwrnirvqgpttflpsltvqvamagamliglhh
ricyttsasvlteavkqsdlpsgydhlcqfvmsgqlsdseklleslenfwngiqewterh
gyivdvskripf