Lineage for d6p06b2 (6p06 B:126-253)

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2699446Fold a.24: Four-helical up-and-down bundle [47161] (29 superfamilies)
    core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down
  4. 2700508Superfamily a.24.16: Nucleotidyltransferase substrate binding subunit/domain [81593] (5 families) (S)
  5. 2700509Family a.24.16.1: Kanamycin nucleotidyltransferase (KNTase), C-terminal domain [81592] (2 proteins)
    N-terminal catalytic domain is followed by an all-alpha domain
    automatically mapped to Pfam PF07827
  6. 2700516Protein automated matches [379001] (3 species)
    not a true protein
  7. 2700517Species Bacillus sp. [TaxId:1409] [379552] (4 PDB entries)
  8. 2700525Domain d6p06b2: 6p06 B:126-253 [379555]
    Other proteins in same PDB: d6p06a1, d6p06b1
    automated match to d1kana1
    protein/DNA complex; complexed with apc, ca, nmy; mutant

Details for d6p06b2

PDB Entry: 6p06 (more details), 2.3 Å

PDB Description: ternary structure of the e52d mutant of ant-4 with neomycin and ampcpp
PDB Compounds: (B:) kanamycin nucleotidyltransferase

SCOPe Domain Sequences for d6p06b2:

Sequence; same for both SEQRES and ATOM records: (download)

>d6p06b2 a.24.16.1 (B:126-253) automated matches {Bacillus sp. [TaxId: 1409]}
veaqkfhdaicaliveelfeyagkwrnirvqgpttflpsltvqvamagamliglhhricy
ttsasvlteavkqsdlpsgydhlcqfvmsgqlsdseklleslenfwngiqewterhgyiv
dvskripf

SCOPe Domain Coordinates for d6p06b2:

Click to download the PDB-style file with coordinates for d6p06b2.
(The format of our PDB-style files is described here.)

Timeline for d6p06b2:

View in 3D
Domains from same chain:
(mouse over for more information)
d6p06b1