PDB entry 6msf

View 6msf on RCSB PDB site
Description: f6 aptamer ms2 coat protein complex
Class: Virus/RNA
Keywords: VIRAL COAT PROTEIN/RNA COMPLEX, RNA APTAMER, RNA STEM LOOP, BACTERIOPHAGE MS2, Icosahedral virus, Virus/RNA COMPLEX
Deposited on 1998-01-06, released 1998-07-08
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-07.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.195
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (ms2 protein capsid)
    Species: Enterobacteria phage MS2 [TaxId:12022]
    Gene: COAT PROTEIN
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d6msfa_
  • Chain 'B':
    Compound: protein (ms2 protein capsid)
    Species: Enterobacteria phage MS2 [TaxId:12022]
    Gene: COAT PROTEIN
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d6msfb_
  • Chain 'C':
    Compound: protein (ms2 protein capsid)
    Species: Enterobacteria phage MS2 [TaxId:12022]
    Gene: COAT PROTEIN
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d6msfc_
  • Chain 'R':
    Compound: RNA (5'-r(*cp*cp*ap*cp*ap*gp*up*cp*ap*cp*up*gp*gp*g)-3')
  • Chain 'S':
    Compound: RNA (5'-r(*cp*ap*gp*up*cp*ap*cp*up*gp*g)-3')
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6msfA (A:)
asnftqfvlvdnggtgdvtvapsnfangvaewissnsrsqaykvtcsvrqssaqnrkyti
kvevpkvatqtvggvelpvaawrsylnmeltipifatnsdcelivkamqgllkdgnpips
aiaansgiy

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6msfB (B:)
asnftqfvlvdnggtgdvtvapsnfangvaewissnsrsqaykvtcsvrqssaqnrkyti
kvevpkvatqtvggvelpvaawrsylnmeltipifatnsdcelivkamqgllkdgnpips
aiaansgiy

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6msfC (C:)
asnftqfvlvdnggtgdvtvapsnfangvaewissnsrsqaykvtcsvrqssaqnrkyti
kvevpkvatqtvggvelpvaawrsylnmeltipifatnsdcelivkamqgllkdgnpips
aiaansgiy

  • Chain 'R':
    No sequence available.

  • Chain 'S':
    No sequence available.