PDB entry 6jf5

View 6jf5 on RCSB PDB site
Description: K2U bound crystal structure of class I type b peptide deformylase from Acinetobacter baumannii
Class: hydrolase
Keywords: peptide deformylase, hydrolase
Deposited on 2019-02-08, released 2020-02-12
The last revision prior to the SCOPe 2.07 freeze date was dated 2020-02-12, with a file datestamp of 2020-02-07.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peptide deformylase
    Species: ACINETOBACTER BAUMANNII [TaxId:470]
    Gene: def_1, def, def2, def_2, ABUW_2937, APD06_18825, BWP00_08140, C2U32_01090, CBI29_01007, DCD77_14985, DGS69_13130, DOL94_15075, SAMEA104305268_00677, SAMEA104305292_01437, SAMEA104305351_01290
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6jf5a_
  • Chain 'B':
    Compound: Peptide deformylase
    Species: ACINETOBACTER BAUMANNII [TaxId:470]
    Gene: def_1, def, def2, def_2, ABUW_2937, APD06_18825, BWP00_08140, C2U32_01090, CBI29_01007, DCD77_14985, DGS69_13130, DOL94_15075, SAMEA104305268_00677, SAMEA104305292_01437, SAMEA104305351_01290
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6jf5b_
  • Heterogens: ZN, K2U, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6jf5A (A:)
svvlpvakrgedilkliaapvsanelnsnwlyqladamhatmlerngvgiaapqvyiskr
viivasrpnprypdapemnavvmvnpeilefssetclgeegclsvpdergqveraemvkv
kyltlqgeavetifhgfparivqhevdhlngilfveris

    Sequence, based on observed residues (ATOM records): (download) 
    >6jf5A (A:)
svvlpvakrgedilkliaapvsanelnsnwlyqladamhatmlerngvgiaapqvyiskr
viivamnavvmvnpeilefssetclgeegclsvpdergqveraemvkvkyltlqgeavet
ifhgfparivqhevdhlngilfver

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6jf5B (B:)
svvlpvakrgedilkliaapvsanelnsnwlyqladamhatmlerngvgiaapqvyiskr
viivasrpnprypdapemnavvmvnpeilefssetclgeegclsvpdergqveraemvkv
kyltlqgeavetifhgfparivqhevdhlngilfveris

    Sequence, based on observed residues (ATOM records): (download) 
    >6jf5B (B:)
svvlpvakrgedilkliaapvsanelnsnwlyqladamhatmlerngvgiaapqvyiskr
viivasrpnprypdapemnavvmvnpeilefssetclgeegclsvpdergqveraemvkv
kyltlqgeavetifhgfparivqhevdhlngilfveri