PDB entry 6e6m

View 6e6m on RCSB PDB site
Description: Crystal structure of human cellular retinol-binding protein 1 in complex with cannabidiorcin (CBDO)
Class: lipid binding protein
Keywords: vitamin A, retinol, CBDO, cannabidiorcin, LIPID BINDING PROTEIN
Deposited on 2018-07-25, released 2019-02-13
The last revision prior to the SCOPe 2.07 freeze date was dated 2019-02-13, with a file datestamp of 2019-02-08.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: N/A
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Retinol-binding protein 1
    Species: Homo sapiens [TaxId:9606]
    Gene: RBP1, CRBP1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P09455 (0-133)
      • expression tag (134-135)
    Domains in SCOPe 2.07: d6e6ma1, d6e6ma2
  • Chain 'B':
    Compound: Retinol-binding protein 1
    Species: Homo sapiens [TaxId:9606]
    Gene: RBP1, CRBP1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P09455 (Start-133)
      • expression tag (134-135)
    Domains in SCOPe 2.07: d6e6mb1, d6e6mb2
  • Chain 'C':
    Compound: Retinol-binding protein 1
    Species: Homo sapiens [TaxId:9606]
    Gene: RBP1, CRBP1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P09455 (Start-133)
      • expression tag (134-135)
    Domains in SCOPe 2.07: d6e6mc1, d6e6mc2
  • Heterogens: 8CB, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6e6mA (A:)
pvdftgywkmlvnenfeeylraldvnvalrkianllkpdkeivqdgdhmiirtlstfrny
imdfqvgkefeedltgiddrkcmttvswdgdklqcvqkgekegrgwtqwiegdelhlemr
vegvvckqvfkkvqhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6e6mA (A:)
pvdftgywkmlvnenfeeylraldvnvalrkianllkpdkeivqdgdhmiirtlstfrny
imdfqvgkefeedltgiddrkcmttvswdgdklqcvqkgekegrgwtqwiegdelhlemr
vegvvckqvfkkvqhh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6e6mB (B:)
pvdftgywkmlvnenfeeylraldvnvalrkianllkpdkeivqdgdhmiirtlstfrny
imdfqvgkefeedltgiddrkcmttvswdgdklqcvqkgekegrgwtqwiegdelhlemr
vegvvckqvfkkvqhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6e6mB (B:)
vdftgywkmlvnenfeeylraldvnvalrkianllkpdkeivqdgdhmiirtlstfrnyi
mdfqvgkefeedltgiddrkcmttvswdgdklqcvqkgekegrgwtqwiegdelhlemrv
egvvckqvfkkvqhh

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6e6mC (C:)
pvdftgywkmlvnenfeeylraldvnvalrkianllkpdkeivqdgdhmiirtlstfrny
imdfqvgkefeedltgiddrkcmttvswdgdklqcvqkgekegrgwtqwiegdelhlemr
vegvvckqvfkkvqhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6e6mC (C:)
vdftgywkmlvnenfeeylraldvnvalrkianllkpdkeivqdgdhmiirtlstfrnyi
mdfqvgkefeedltgiddrkcmttvswdgdklqcvqkgekegrgwtqwiegdelhlemrv
egvvckqvfkkvqhh