PDB entry 6cv6

View 6cv6 on RCSB PDB site
Description: Crystal structure of 3-dehydroquinate dehydratase, type II, from Burkholderia phymatum STM815
Class: lyase
Keywords: SSGCID, chorismate biosynthesis, 3-dehydroshikimate, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, LYASE
Deposited on 2018-03-27, released 2018-04-11
The last revision prior to the SCOPe 2.07 freeze date was dated 2018-04-11, with a file datestamp of 2018-04-06.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 3-dehydroquinate dehydratase
    Species: Paraburkholderia phymatum [TaxId:391038]
    Gene: aroQ, Bphy_6025
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6cv6a_
  • Chain 'B':
    Compound: 3-dehydroquinate dehydratase
    Species: Paraburkholderia phymatum [TaxId:391038]
    Gene: aroQ, Bphy_6025
    Database cross-references and differences (RAF-indexed):
    • Uniprot B2JVW0 (19-End)
      • expression tag (18)
    Domains in SCOPe 2.07: d6cv6b1, d6cv6b2
  • Chain 'C':
    Compound: 3-dehydroquinate dehydratase
    Species: Paraburkholderia phymatum [TaxId:391038]
    Gene: aroQ, Bphy_6025
    Database cross-references and differences (RAF-indexed):
    • Uniprot B2JVW0 (19-End)
      • expression tag (18)
    Domains in SCOPe 2.07: d6cv6c1, d6cv6c2
  • Chain 'D':
    Compound: 3-dehydroquinate dehydratase
    Species: Paraburkholderia phymatum [TaxId:391038]
    Gene: aroQ, Bphy_6025
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6cv6d_
  • Chain 'E':
    Compound: 3-dehydroquinate dehydratase
    Species: Paraburkholderia phymatum [TaxId:391038]
    Gene: aroQ, Bphy_6025
    Database cross-references and differences (RAF-indexed):
    • Uniprot B2JVW0 (19-End)
      • expression tag (18)
    Domains in SCOPe 2.07: d6cv6e1, d6cv6e2
  • Chain 'F':
    Compound: 3-dehydroquinate dehydratase
    Species: Paraburkholderia phymatum [TaxId:391038]
    Gene: aroQ, Bphy_6025
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6cv6f_
  • Chain 'G':
    Compound: 3-dehydroquinate dehydratase
    Species: Paraburkholderia phymatum [TaxId:391038]
    Gene: aroQ, Bphy_6025
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6cv6g_
  • Chain 'H':
    Compound: 3-dehydroquinate dehydratase
    Species: Paraburkholderia phymatum [TaxId:391038]
    Gene: aroQ, Bphy_6025
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6cv6h_
  • Chain 'I':
    Compound: 3-dehydroquinate dehydratase
    Species: Paraburkholderia phymatum [TaxId:391038]
    Gene: aroQ, Bphy_6025
    Database cross-references and differences (RAF-indexed):
    • Uniprot B2JVW0 (19-End)
      • expression tag (18)
    Domains in SCOPe 2.07: d6cv6i1, d6cv6i2
  • Chain 'J':
    Compound: 3-dehydroquinate dehydratase
    Species: Paraburkholderia phymatum [TaxId:391038]
    Gene: aroQ, Bphy_6025
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6cv6j_
  • Chain 'K':
    Compound: 3-dehydroquinate dehydratase
    Species: Paraburkholderia phymatum [TaxId:391038]
    Gene: aroQ, Bphy_6025
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6cv6k_
  • Chain 'L':
    Compound: 3-dehydroquinate dehydratase
    Species: Paraburkholderia phymatum [TaxId:391038]
    Gene: aroQ, Bphy_6025
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6cv6l_
  • Heterogens: TLA, TAR, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6cv6A (A:)
    hhhhhhmgtleaqtqgpgsmkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaae
    lgvqvesfqtnsegamcerihqafeercdavlinagawthysygirdalailtcpvvelh
    msnvharepfrhhsvfsevvvgqicgfgmesyllalraavaqsgcs
    

    Sequence, based on observed residues (ATOM records): (download)
    >6cv6A (A:)
    mkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaaelgvqvesfqtnsegamcer
    ihqafeercdavlinagawthysygirdalailtcpvvelhmsnvharepfrhhsvfsev
    vvgqicgfgmesyllalraavaqsg
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >6cv6B (B:)
    hhhhhhmgtleaqtqgpgsmkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaae
    lgvqvesfqtnsegamcerihqafeercdavlinagawthysygirdalailtcpvvelh
    msnvharepfrhhsvfsevvvgqicgfgmesyllalraavaqsgcs
    

    Sequence, based on observed residues (ATOM records): (download)
    >6cv6B (B:)
    smkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaaelgvqvesfqtnsegamce
    rihqafeercdavlinagawthysygirdalailtcpvvelhmsnvharepfrhhsvfse
    vvvgqicgfgmesyllalraavaqs
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >6cv6C (C:)
    hhhhhhmgtleaqtqgpgsmkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaae
    lgvqvesfqtnsegamcerihqafeercdavlinagawthysygirdalailtcpvvelh
    msnvharepfrhhsvfsevvvgqicgfgmesyllalraavaqsgcs
    

    Sequence, based on observed residues (ATOM records): (download)
    >6cv6C (C:)
    smkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaaelgvqvesfqtnsegamce
    rihqafeercdavlinagawthysygirdalailtcpvvelhmsnvharepfrhhsvfse
    vvvgqicgfgmesyllalraavaqs
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >6cv6D (D:)
    hhhhhhmgtleaqtqgpgsmkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaae
    lgvqvesfqtnsegamcerihqafeercdavlinagawthysygirdalailtcpvvelh
    msnvharepfrhhsvfsevvvgqicgfgmesyllalraavaqsgcs
    

    Sequence, based on observed residues (ATOM records): (download)
    >6cv6D (D:)
    mkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaaelgvqvesfqtnsegamcer
    ihqafeercdavlinagawthysygirdalailtcpvvelhmsnvharepfrhhsvfsev
    vvgqicgfgmesyllalraavaqs
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >6cv6E (E:)
    hhhhhhmgtleaqtqgpgsmkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaae
    lgvqvesfqtnsegamcerihqafeercdavlinagawthysygirdalailtcpvvelh
    msnvharepfrhhsvfsevvvgqicgfgmesyllalraavaqsgcs
    

    Sequence, based on observed residues (ATOM records): (download)
    >6cv6E (E:)
    smkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaaelgvqvesfqtnsegamce
    rihqafeercdavlinagawthysygirdalailtcpvvelhmsnvharepfrhhsvfse
    vvvgqicgfgmesyllalraavaqs
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >6cv6F (F:)
    hhhhhhmgtleaqtqgpgsmkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaae
    lgvqvesfqtnsegamcerihqafeercdavlinagawthysygirdalailtcpvvelh
    msnvharepfrhhsvfsevvvgqicgfgmesyllalraavaqsgcs
    

    Sequence, based on observed residues (ATOM records): (download)
    >6cv6F (F:)
    mkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaaelgvqvesfqtnsegamcer
    ihqafeercdavlinagawthysygirdalailtcpvvelhmsnvharepfrhhsvfsev
    vvgqicgfgmesyllalraavaqsg
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >6cv6G (G:)
    hhhhhhmgtleaqtqgpgsmkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaae
    lgvqvesfqtnsegamcerihqafeercdavlinagawthysygirdalailtcpvvelh
    msnvharepfrhhsvfsevvvgqicgfgmesyllalraavaqsgcs
    

    Sequence, based on observed residues (ATOM records): (download)
    >6cv6G (G:)
    mkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaaelgvqvesfqtnsegamcer
    ihqafeercdavlinagawthysygirdalailtcpvvelhmsnvharepfrhhsvfsev
    vvgqicgfgmesyllalraavaqsg
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >6cv6H (H:)
    hhhhhhmgtleaqtqgpgsmkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaae
    lgvqvesfqtnsegamcerihqafeercdavlinagawthysygirdalailtcpvvelh
    msnvharepfrhhsvfsevvvgqicgfgmesyllalraavaqsgcs
    

    Sequence, based on observed residues (ATOM records): (download)
    >6cv6H (H:)
    mkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaaelgvqvesfqtnsegamcer
    ihqafeercdavlinagawthysygirdalailtcpvvelhmsnvharepfrhhsvfsev
    vvgqicgfgmesyllalraavaqsg
    

  • Chain 'I':
    Sequence, based on SEQRES records: (download)
    >6cv6I (I:)
    hhhhhhmgtleaqtqgpgsmkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaae
    lgvqvesfqtnsegamcerihqafeercdavlinagawthysygirdalailtcpvvelh
    msnvharepfrhhsvfsevvvgqicgfgmesyllalraavaqsgcs
    

    Sequence, based on observed residues (ATOM records): (download)
    >6cv6I (I:)
    smkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaaelgvqvesfqtnsegamce
    rihqafeercdavlinagawthysygirdalailtcpvvelhmsnvharepfrhhsvfse
    vvvgqicgfgmesyllalraavaqsg
    

  • Chain 'J':
    Sequence, based on SEQRES records: (download)
    >6cv6J (J:)
    hhhhhhmgtleaqtqgpgsmkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaae
    lgvqvesfqtnsegamcerihqafeercdavlinagawthysygirdalailtcpvvelh
    msnvharepfrhhsvfsevvvgqicgfgmesyllalraavaqsgcs
    

    Sequence, based on observed residues (ATOM records): (download)
    >6cv6J (J:)
    mkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaaelgvqvesfqtnsegamcer
    ihqafeercdavlinagawthysygirdalailtcpvvelhmsnvharepfrhhsvfsev
    vvgqicgfgmesyllalraavaqs
    

  • Chain 'K':
    Sequence, based on SEQRES records: (download)
    >6cv6K (K:)
    hhhhhhmgtleaqtqgpgsmkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaae
    lgvqvesfqtnsegamcerihqafeercdavlinagawthysygirdalailtcpvvelh
    msnvharepfrhhsvfsevvvgqicgfgmesyllalraavaqsgcs
    

    Sequence, based on observed residues (ATOM records): (download)
    >6cv6K (K:)
    mkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaaelgvqvesfqtnsegamcer
    ihqafeercdavlinagawthysygirdalailtcpvvelhmsnvharepfrhhsvfsev
    vvgqicgfgmesyllalraavaqs
    

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >6cv6L (L:)
    hhhhhhmgtleaqtqgpgsmkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaae
    lgvqvesfqtnsegamcerihqafeercdavlinagawthysygirdalailtcpvvelh
    msnvharepfrhhsvfsevvvgqicgfgmesyllalraavaqsgcs
    

    Sequence, based on observed residues (ATOM records): (download)
    >6cv6L (L:)
    mkkvlmlhginhnmfgkrdpvqygtitlseidnrlqalaaelgvqvesfqtnsegamcer
    ihqafeercdavlinagawthysygirdalailtcpvvelhmsnvharepfrhhsvfsev
    vvgqicgfgmesyllalraavaqs