PDB entry 5wta

View 5wta on RCSB PDB site
Description: Crystal Structure of Staphylococcus aureus SdrE apo form
Class: cell adhesion
Keywords: Surface protein, Staphylococcus aureus, Sdr family, complement evasion, CELL ADHESION
Deposited on 2016-12-10, released 2017-07-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-07-19, with a file datestamp of 2017-07-14.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Serine-aspartate repeat-containing protein E
    Species: Staphylococcus aureus (strain Mu50 / ATCC 700699) [TaxId:158878]
    Gene: sdrE, SAV0563
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q932F7
      • engineered mutation (219)
    Domains in SCOPe 2.08: d5wtaa1, d5wtaa2
  • Chain 'B':
    Compound: Serine-aspartate repeat-containing protein E
    Species: Staphylococcus aureus (strain Mu50 / ATCC 700699) [TaxId:158878]
    Gene: sdrE, SAV0563
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q932F7
      • engineered mutation (219)
    Domains in SCOPe 2.08: d5wtab1, d5wtab2
  • Chain 'C':
    Compound: Serine-aspartate repeat-containing protein E
    Species: Staphylococcus aureus (strain Mu50 / ATCC 700699) [TaxId:158878]
    Gene: sdrE, SAV0563
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q932F7
      • engineered mutation (219)
    Domains in SCOPe 2.08: d5wtac1, d5wtac2
  • Chain 'D':
    Compound: Serine-aspartate repeat-containing protein E
    Species: Staphylococcus aureus (strain Mu50 / ATCC 700699) [TaxId:158878]
    Gene: sdrE, SAV0563
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q932F7
      • engineered mutation (219)
    Domains in SCOPe 2.08: d5wtad1, d5wtad2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5wtaA (A:)
vasnnvndlitvtkqtikvgdgkdnvaaahdgkdieydteftidnkvkkgdtmtinydkn
vipsdltdkndpiditdpsgeviakgtfdkatkqitytftdyvdkyedikarltlysyid
kqavpnetslnltfatagketsqnvsvdyqdpmvhgdsniqsiftkldenkqtieqqiyv
nplkktatntkvdiagsqvddygniklgngstiidqntemkvykvnpnqqlpqsnriydf
sqyedvtsqfdnkksfsnnvatldfgdinsayiikvvskytptsdgeldiaqgtsmrttd
kygyynyagysnfivtsndtgggdgtvkpelehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5wtaA (A:)
snnvndlitvtkqtikvgdgkdnvaaahdgkdieydteftidnkvkkgdtmtinydknvi
psdltdkndpiditdpsgeviakgtfdkatkqitytftdyvdkyedikarltlysyidkq
avpnetslnltfatagketsqnvsvdyqdpmvhgdsniqsiftkldenkqtieqqiyvnp
lkktatntkvdiagsqvddygniklgngstiidqntemkvykvnpnqqlpqsnriydfsq
yedvtsqfdnkksfsnnvatldfgdinsayiikvvskytptsdgeldiaqgtsmrttdky
gyynyagysnfivts

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5wtaB (B:)
vasnnvndlitvtkqtikvgdgkdnvaaahdgkdieydteftidnkvkkgdtmtinydkn
vipsdltdkndpiditdpsgeviakgtfdkatkqitytftdyvdkyedikarltlysyid
kqavpnetslnltfatagketsqnvsvdyqdpmvhgdsniqsiftkldenkqtieqqiyv
nplkktatntkvdiagsqvddygniklgngstiidqntemkvykvnpnqqlpqsnriydf
sqyedvtsqfdnkksfsnnvatldfgdinsayiikvvskytptsdgeldiaqgtsmrttd
kygyynyagysnfivtsndtgggdgtvkpelehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5wtaB (B:)
snnvndlitvtkqtikvgdgkdnvaaahdgkdieydteftidnkvkkgdtmtinydknvi
psdltdkndpiditdpsgeviakgtfdkatkqitytftdyvdkyedikarltlysyidkq
avpnetslnltfatagketsqnvsvdyqdpmvhgdsniqsiftkldenkqtieqqiyvnp
lkktatntkvdiagsqvddygniklgngstiidqntemkvykvnpnqqlpqsnriydfsq
yedvtsqfdnkksfsnnvatldfgdinsayiikvvskytptsdgeldiaqgtsmrttdky
gyynyagysnfivts

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5wtaC (C:)
vasnnvndlitvtkqtikvgdgkdnvaaahdgkdieydteftidnkvkkgdtmtinydkn
vipsdltdkndpiditdpsgeviakgtfdkatkqitytftdyvdkyedikarltlysyid
kqavpnetslnltfatagketsqnvsvdyqdpmvhgdsniqsiftkldenkqtieqqiyv
nplkktatntkvdiagsqvddygniklgngstiidqntemkvykvnpnqqlpqsnriydf
sqyedvtsqfdnkksfsnnvatldfgdinsayiikvvskytptsdgeldiaqgtsmrttd
kygyynyagysnfivtsndtgggdgtvkpelehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5wtaC (C:)
nnvndlitvtkqtikvgdgkdnvaaahdgkdieydteftidnkvkkgdtmtinydknvip
sdltdkndpiditdpsgeviakgtfdkatkqitytftdyvdkyedikarltlysyidkqa
vpnetslnltfatagketsqnvsvdyqdpmvhgdsniqsiftkldenkqtieqqiyvnpl
kktatntkvdiagsqvddygniklgngstiidqntemkvykvnpnqqlpqsnriydfsqy
edvtsqfdnkksfsnnvatldfgdinsayiikvvskytptsdgeldiaqgtsmrttdkyg
yynyagysnfivts

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5wtaD (D:)
vasnnvndlitvtkqtikvgdgkdnvaaahdgkdieydteftidnkvkkgdtmtinydkn
vipsdltdkndpiditdpsgeviakgtfdkatkqitytftdyvdkyedikarltlysyid
kqavpnetslnltfatagketsqnvsvdyqdpmvhgdsniqsiftkldenkqtieqqiyv
nplkktatntkvdiagsqvddygniklgngstiidqntemkvykvnpnqqlpqsnriydf
sqyedvtsqfdnkksfsnnvatldfgdinsayiikvvskytptsdgeldiaqgtsmrttd
kygyynyagysnfivtsndtgggdgtvkpelehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5wtaD (D:)
nnvndlitvtkqtikvgdgkdnvaaahdgkdieydteftidnkvkkgdtmtinydknvip
sdltdkndpiditdpsgeviakgtfdkatkqitytftdyvdkyedikarltlysyidkqa
vpnetslnltfatagketsqnvsvdyqdpmvhgdsniqsiftkldenkqtieqqiyvnpl
kktatntkvdiagsqvddygniklgngstiidqntemkvykvnpnqqlpqsnriydfsqy
edvtsqfdnkksfsnnvatldfgdinsayiikvvskytptsdgeldiaqgtsmrttdkyg
yynyagysnfivts