PDB entry 5u3q
View 5u3q on RCSB PDB site
Description: Human PPARdelta ligand-binding domain in complexed with specific agonist 1
Class: protein binding/activator
Keywords: PPARdelta, ligand-binding domain, agonist, protein binding-activator complex
Deposited on
2016-12-03, released
2017-03-22
The last revision prior to the SCOPe 2.06 freeze date was dated
2017-03-22, with a file datestamp of
2017-03-17.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.49
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Peroxisome proliferator-activated receptor delta
Species: Homo sapiens [TaxId:9606]
Gene: PPARD, NR1C2, PPARB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5u3qa_ - Chain 'B':
Compound: Peroxisome proliferator-activated receptor delta
Species: Homo sapiens [TaxId:9606]
Gene: PPARD, NR1C2, PPARB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5u3qb_ - Heterogens: 7UJ, B7G, PGO, PEG, K, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5u3qA (A:)
pqvadlkafskhiynaylknfnmtkkkarsiltgkashtapfvihdietlwqaekglvwk
qlvnglppykeisvhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvhea
ifamlasivnkdgllvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdla
lfiaaiilcgdrpglmnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrql
vtehaqmmqrikktetetslhpllqeiykdmy
Sequence, based on observed residues (ATOM records): (download)
>5u3qA (A:)
adlkafskhiynaylknfnmtkkkarsiltgtapfvihdietlwqaekglvwkqlvnglp
pykeisvhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvheaifamlas
ivnkdgllvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdlalfiaaii
lcgdrpglmnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrqlvtehaqm
mqrikktetetslhpllqeiykdmy
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5u3qB (B:)
pqvadlkafskhiynaylknfnmtkkkarsiltgkashtapfvihdietlwqaekglvwk
qlvnglppykeisvhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvhea
ifamlasivnkdgllvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdla
lfiaaiilcgdrpglmnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrql
vtehaqmmqrikktetetslhpllqeiykdmy
Sequence, based on observed residues (ATOM records): (download)
>5u3qB (B:)
pqvadlkafskhiynaylknfnmtkkkarsiltgkashtapfvihdietlwqaekglvwk
qlvnglppykeisvhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvhea
ifamlasivnkdgllvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdla
lfiaaiilcgdrpglmnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrql
vtehaqmmqrikktetetslhpllqeiykdm