PDB entry 5msf

View 5msf on RCSB PDB site
Description: ms2 protein capsid/RNA complex
Class: Virus/RNA
Keywords: CAPSID PROTEIN MS2/RNA APTAMER COMPLEX, RNA-PROTEIN COMPLEX, RNA STEM LOOP, BACTERIOPHAGE MS2, Icosahedral virus, Virus/RNA COMPLEX
Deposited on 1998-05-15, released 1998-11-11
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-03-24, with a file datestamp of 2009-03-20.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.188
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ms2 protein capsid
    Species: Enterobacteria phage MS2 [TaxId:12022]
    Gene: COAT PROTEIN
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5msfa_
  • Chain 'B':
    Compound: ms2 protein capsid
    Species: Enterobacteria phage MS2 [TaxId:12022]
    Gene: COAT PROTEIN
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5msfb_
  • Chain 'C':
    Compound: ms2 protein capsid
    Species: Enterobacteria phage MS2 [TaxId:12022]
    Gene: COAT PROTEIN
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5msfc_
  • Chain 'R':
    Compound: 5'-r(*cp*cp*gp*gp*ap*gp*gp*ap*up*cp*ap*cp*cp*ap*cp*gp*gp*g)-3'
    Species: synthetic, synthetic
  • Chain 'S':
    Compound: 5'-r(*cp*cp*gp*gp*ap*gp*gp*ap*up*cp*ap*cp*cp*ap*cp*gp*gp*g)-3'
    Species: synthetic, synthetic
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5msfA (A:)
asnftqfvlvdnggtgdvtvapsnfangvaewissnsrsqaykvtcsvrqssaqnrkyti
kvevpkvatqtvggvelpvaawrsylnmeltipifatnsdcelivkamqgllkdgnpips
aiaansgiy

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5msfB (B:)
asnftqfvlvdnggtgdvtvapsnfangvaewissnsrsqaykvtcsvrqssaqnrkyti
kvevpkvatqtvggvelpvaawrsylnmeltipifatnsdcelivkamqgllkdgnpips
aiaansgiy

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5msfC (C:)
asnftqfvlvdnggtgdvtvapsnfangvaewissnsrsqaykvtcsvrqssaqnrkyti
kvevpkvatqtvggvelpvaawrsylnmeltipifatnsdcelivkamqgllkdgnpips
aiaansgiy

  • Chain 'R':
    No sequence available.

  • Chain 'S':
    No sequence available.