PDB entry 5m3g
View 5m3g on RCSB PDB site
Description: Structure of the TagL peptidoglycan binding domain from EAEC T6SS
Class: Peptidoglycan-binding protein
Keywords: T6SS TagL Peptidoglycan binding domain Diaminopimelate, Peptidoglycan-binding protein
Deposited on
2016-10-14, released
2018-02-21
Made obsolete by
7bba on
2021-08-04
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-02-21, with a file datestamp of 2018-02-16.
Experiment type: XRAY
Resolution: 2.43 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: OmpA family protein
Species: Escherichia coli [TaxId:562]
Gene: ACU81_04615
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5m3ga_ - Chain 'B':
Compound: OmpA family protein
Species: Escherichia coli [TaxId:562]
Gene: ACU81_04615
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5m3gb_ - Chain 'C':
Compound: OmpA family protein
Species: Escherichia coli [TaxId:562]
Gene: ACU81_04615
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5m3gc_ - Chain 'D':
Compound: OmpA family protein
Species: Escherichia coli [TaxId:562]
Gene: ACU81_04615
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5m3gd_ - Heterogens: SO4, API, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5m3gA (A:)
pktvrlnslalfdagkwtlkpgatkwlvnalvdikakagwlivvsghtdntgdplrnqal
slkraeavrdwmrdtgdipqscfavqgygesrpvapndtaegrarnrrveislvpqadac
rlpdvspapeegasenite
Sequence, based on observed residues (ATOM records): (download)
>5m3gA (A:)
vrlnslalfdagkwtlkpgatkwlvnalvdikakagwlivvsghtdntgdplrnqalslk
raeavrdwmrdtgdipqscfavqgygesrpvapndtaegrarnrrveislvp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5m3gB (B:)
pktvrlnslalfdagkwtlkpgatkwlvnalvdikakagwlivvsghtdntgdplrnqal
slkraeavrdwmrdtgdipqscfavqgygesrpvapndtaegrarnrrveislvpqadac
rlpdvspapeegasenite
Sequence, based on observed residues (ATOM records): (download)
>5m3gB (B:)
tvrlnslalfdagkwtlkpgatkwlvnalvdikakagwlivvsghtdntgdplrnqalsl
kraeavrdwmrdtgdipqscfavqgygesrpvapndtaegrarnrrveislvp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>5m3gC (C:)
pktvrlnslalfdagkwtlkpgatkwlvnalvdikakagwlivvsghtdntgdplrnqal
slkraeavrdwmrdtgdipqscfavqgygesrpvapndtaegrarnrrveislvpqadac
rlpdvspapeegasenite
Sequence, based on observed residues (ATOM records): (download)
>5m3gC (C:)
tvrlnslalfdagkwtlkpgatkwlvnalvdikakagwlivvsghtdntgdplrnqalsl
kraeavrdwmrdtgdipqscfavqgygesrpvapndtaegrarnrrveislvp
- Chain 'D':
Sequence, based on SEQRES records: (download)
>5m3gD (D:)
pktvrlnslalfdagkwtlkpgatkwlvnalvdikakagwlivvsghtdntgdplrnqal
slkraeavrdwmrdtgdipqscfavqgygesrpvapndtaegrarnrrveislvpqadac
rlpdvspapeegasenite
Sequence, based on observed residues (ATOM records): (download)
>5m3gD (D:)
rlnslalfdagkwtlkpgatkwlvnalvdikakagwlivvsghtdntgdplrnqalslkr
aeavrdwmrdtgdipqscfavqgygesrpvapndtaegrarnrrveislvp