PDB entry 5jjm
View 5jjm on RCSB PDB site
Description: Crystal Structure of Homodimeric Androgen Receptor Ligand-Binding Domain bound to DHT and LxxLL peptide
Class: transcription
Keywords: nuclear receptor, transcription factor, oxosteroid receptor, human androgen receptor, Transcription
Deposited on
2016-04-24, released
2017-03-15
The last revision prior to the SCOPe 2.06 freeze date was dated
2017-03-15, with a file datestamp of
2017-03-10.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: N/A
AEROSPACI score: 0.27
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Androgen receptor
Species: Homo sapiens [TaxId:9606]
Gene: AR, DHTR, NR3C4
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5jjma_ - Chain 'B':
Compound: Androgen receptor
Species: Homo sapiens [TaxId:9606]
Gene: AR, DHTR, NR3C4
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5jjmb_ - Chain 'C':
Compound: Androgen receptor
Species: Homo sapiens [TaxId:9606]
Gene: AR, DHTR, NR3C4
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5jjmc_ - Chain 'D':
Compound: Androgen receptor
Species: Homo sapiens [TaxId:9606]
Gene: AR, DHTR, NR3C4
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5jjmd_ - Chain 'F':
Compound: Unknown peptide
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'G':
Compound: uba3-derived peptide
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: uba3-derived peptide
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'I':
Compound: uba3-derived peptide
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'J':
Compound: uba3-derived peptide
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'K':
Compound: Unknown peptide
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: Unknown peptide
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'M':
Compound: Unknown peptide
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Heterogens: DHT, ZN, CL, EDO, GOL, SO4, PGE, ACT, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>5jjmA (A:)
ecqpiflnvleaiepgvvcaghdnnqpdsfaallsslnelgerqlvhvvkwakalpgfrn
lhvddqmaviqyswmglmvfamgwrsftnvnsrmlyfapdlvfneyrmhksrmysqcvrm
rhlsqefgwlqitpqeflcmkalllfsiipvdglknqkffdelrmnyikeldriiackrk
nptscsrrfyqltklldsvqpiarelhqftfdllikshmvsvdfpemmaeiisvqvpkil
sgkvkpiyfhtq
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5jjmB (B:)
ecqpiflnvleaiepgvvcaghdnnqpdsfaallsslnelgerqlvhvvkwakalpgfrn
lhvddqmaviqyswmglmvfamgwrsftnvnsrmlyfapdlvfneyrmhksrmysqcvrm
rhlsqefgwlqitpqeflcmkalllfsiipvdglknqkffdelrmnyikeldriiackrk
nptscsrrfyqltklldsvqpiarelhqftfdllikshmvsvdfpemmaeiisvqvpkil
sgkvkpiyfhtq
Sequence, based on observed residues (ATOM records): (download)
>5jjmB (B:)
cqpiflnvleaiepgvvcaghdnnqpdsfaallsslnelgerqlvhvvkwakalpgfrnl
hvddqmaviqyswmglmvfamgwrsftnvnsrmlyfapdlvfneyrmhksrmysqcvrmr
hlsqefgwlqitpqeflcmkalllfsiipvdglknqkffdelrmnyikeldriiackrkn
ptscsrrfyqltklldsvqpiarelhqftfdllikshmvsvdfpemmaeiisvqvpkils
gkvkpiyfhtq
- Chain 'C':
Sequence, based on SEQRES records: (download)
>5jjmC (C:)
ecqpiflnvleaiepgvvcaghdnnqpdsfaallsslnelgerqlvhvvkwakalpgfrn
lhvddqmaviqyswmglmvfamgwrsftnvnsrmlyfapdlvfneyrmhksrmysqcvrm
rhlsqefgwlqitpqeflcmkalllfsiipvdglknqkffdelrmnyikeldriiackrk
nptscsrrfyqltklldsvqpiarelhqftfdllikshmvsvdfpemmaeiisvqvpkil
sgkvkpiyfhtq
Sequence, based on observed residues (ATOM records): (download)
>5jjmC (C:)
ecqpiflnvleaiepgvvcaghdnnqpdsfaallsslnelgerqlvhvvkwakalpgfrn
lhvddqmaviqyswmglmvfamgwrsftnvnsrmlyfapdlvfneyrmhksrmysqcvrm
rhlsqefgwlqitpqeflcmkalllfsiipvdglknqkffdelrmnyikeldriiackrk
nptscsrrfyqltklldsvqpiarelhqftfdllikshmvsvdfpemmaeiisvqvpkil
sgkvkpiyfh
- Chain 'D':
Sequence, based on SEQRES records: (download)
>5jjmD (D:)
ecqpiflnvleaiepgvvcaghdnnqpdsfaallsslnelgerqlvhvvkwakalpgfrn
lhvddqmaviqyswmglmvfamgwrsftnvnsrmlyfapdlvfneyrmhksrmysqcvrm
rhlsqefgwlqitpqeflcmkalllfsiipvdglknqkffdelrmnyikeldriiackrk
nptscsrrfyqltklldsvqpiarelhqftfdllikshmvsvdfpemmaeiisvqvpkil
sgkvkpiyfhtq
Sequence, based on observed residues (ATOM records): (download)
>5jjmD (D:)
cqpiflnvleaiepgvvcaghdnnqpdsfaallsslnelgerqlvhvvkwakalpgfrnl
hvddqmaviqyswmglmvfamgwrsftnvnsrmlyfapdlvfneyrmhksrmysqcvrmr
hlsqefgwlqitpqeflcmkalllfsiipvdglknqkffdelrmnyikeldriiackrkn
ptscsrrfyqltklldsvqpiarelhqftfdllikshmvsvdfpemmaeiisvqvpkils
gkvkpiyfh
- Chain 'F':
No sequence available.
- Chain 'G':
No sequence available.
- Chain 'H':
No sequence available.
- Chain 'I':
No sequence available.
- Chain 'J':
No sequence available.
- Chain 'K':
No sequence available.
- Chain 'L':
No sequence available.
- Chain 'M':
No sequence available.