PDB entry 5iba

View 5iba on RCSB PDB site
Description: Structure of the recombinantly produced type-II 3-dehydroquinate dehydratase from Acinetobacter baumannii at 2.00A resolution.
Class: lyase
Keywords: lyase
Deposited on 2016-02-22, released 2016-03-30
Made obsolete by 5b6p on 2016-09-07

The last revision prior to the SCOPe 2.06 freeze date was dated 2016-03-30, with a file datestamp of 2016-03-25.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: 3-dehydroquinate dehydratase
  Species: Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377) [TaxId:400667]
  Gene: aroQ, A1S_2009
  Database cross-references and differences (RAF-indexed):
  • Uniprot A3M692 (0-150)
  Domains in SCOPe 2.06: d5ibaa_
• Chain 'B':
  Compound: 3-dehydroquinate dehydratase
  Species: Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377) [TaxId:400667]
  Gene: aroQ, A1S_2009
  Database cross-references and differences (RAF-indexed):
  • Uniprot A3M692 (0-150)
  Domains in SCOPe 2.06: d5ibab_
• Chain 'C':
  Compound: 3-dehydroquinate dehydratase
  Species: Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377) [TaxId:400667]
  Gene: aroQ, A1S_2009
  Database cross-references and differences (RAF-indexed):
  • Uniprot A3M692 (0-150)
  Domains in SCOPe 2.06: d5ibac_
• Chain 'D':
  Compound: 3-dehydroquinate dehydratase
  Species: Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377) [TaxId:400667]
  Gene: aroQ, A1S_2009
  Database cross-references and differences (RAF-indexed):
  • Uniprot A3M692 (0-150)
  Domains in SCOPe 2.06: d5ibad_
• Chain 'E':
  Compound: 3-dehydroquinate dehydratase
  Species: Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377) [TaxId:400667]
  Gene: aroQ, A1S_2009
  Database cross-references and differences (RAF-indexed):
  • Uniprot A3M692 (0-150)
  Domains in SCOPe 2.06: d5ibae_
• Chain 'F':
  Compound: 3-dehydroquinate dehydratase
  Species: Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377) [TaxId:400667]
  Gene: aroQ, A1S_2009
  Database cross-references and differences (RAF-indexed):
  • Uniprot A3M692 (0-150)
  Domains in SCOPe 2.06: d5ibaf_
• Chain 'G':
  Compound: 3-dehydroquinate dehydratase
  Species: Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377) [TaxId:400667]
  Gene: aroQ, A1S_2009
  Database cross-references and differences (RAF-indexed):
  • Uniprot A3M692 (0-150)
  Domains in SCOPe 2.06: d5ibag_
• Chain 'H':
  Compound: 3-dehydroquinate dehydratase
  Species: Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377) [TaxId:400667]
  Gene: aroQ, A1S_2009
  Database cross-references and differences (RAF-indexed):
  • Uniprot A3M692 (0-150)
  Domains in SCOPe 2.06: d5ibah_
• Chain 'I':
  Compound: 3-dehydroquinate dehydratase
  Species: Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377) [TaxId:400667]
  Gene: aroQ, A1S_2009
  Database cross-references and differences (RAF-indexed):
  • Uniprot A3M692 (0-150)
  Domains in SCOPe 2.06: d5ibai_
• Chain 'J':
  Compound: 3-dehydroquinate dehydratase
  Species: Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377) [TaxId:400667]
  Gene: aroQ, A1S_2009
  Database cross-references and differences (RAF-indexed):
  • Uniprot A3M692 (0-150)
  Domains in SCOPe 2.06: d5ibaj_
• Chain 'K':
  Compound: 3-dehydroquinate dehydratase
  Species: Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377) [TaxId:400667]
  Gene: aroQ, A1S_2009
  Database cross-references and differences (RAF-indexed):
  • Uniprot A3M692 (0-150)
  Domains in SCOPe 2.06: d5ibak_
• Chain 'L':
  Compound: 3-dehydroquinate dehydratase
  Species: Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377) [TaxId:400667]
  Gene: aroQ, A1S_2009
  Database cross-references and differences (RAF-indexed):
  • Uniprot A3M692 (0-150)
  Domains in SCOPe 2.06: d5ibal_
• Heterogens: SO4, HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >5ibaA (A:)
  msstilvihgpnlnllgkrepevyghltldninrqliaqaeqasitldtfqsnwegaivd
  rihqaqtegvkliiinpaalthtsvalrdallgvaipfievhlsnvhareafrhhsylsd
  kaigvicglgakgysfaldyaiekiqpsnpn
  

  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >5ibaB (B:)
  msstilvihgpnlnllgkrepevyghltldninrqliaqaeqasitldtfqsnwegaivd
  rihqaqtegvkliiinpaalthtsvalrdallgvaipfievhlsnvhareafrhhsylsd
  kaigvicglgakgysfaldyaiekiqpsnpn
  

  
  
• Chain 'C':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >5ibaC (C:)
  msstilvihgpnlnllgkrepevyghltldninrqliaqaeqasitldtfqsnwegaivd
  rihqaqtegvkliiinpaalthtsvalrdallgvaipfievhlsnvhareafrhhsylsd
  kaigvicglgakgysfaldyaiekiqpsnpn
  

  
  
• Chain 'D':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >5ibaD (D:)
  msstilvihgpnlnllgkrepevyghltldninrqliaqaeqasitldtfqsnwegaivd
  rihqaqtegvkliiinpaalthtsvalrdallgvaipfievhlsnvhareafrhhsylsd
  kaigvicglgakgysfaldyaiekiqpsnpn
  

  
  
• Chain 'E':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >5ibaE (E:)
  msstilvihgpnlnllgkrepevyghltldninrqliaqaeqasitldtfqsnwegaivd
  rihqaqtegvkliiinpaalthtsvalrdallgvaipfievhlsnvhareafrhhsylsd
  kaigvicglgakgysfaldyaiekiqpsnpn
  

  
  
• Chain 'F':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >5ibaF (F:)
  msstilvihgpnlnllgkrepevyghltldninrqliaqaeqasitldtfqsnwegaivd
  rihqaqtegvkliiinpaalthtsvalrdallgvaipfievhlsnvhareafrhhsylsd
  kaigvicglgakgysfaldyaiekiqpsnpn
  

  
  
• Chain 'G':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >5ibaG (G:)
  msstilvihgpnlnllgkrepevyghltldninrqliaqaeqasitldtfqsnwegaivd
  rihqaqtegvkliiinpaalthtsvalrdallgvaipfievhlsnvhareafrhhsylsd
  kaigvicglgakgysfaldyaiekiqpsnpn
  

  
  
• Chain 'H':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >5ibaH (H:)
  msstilvihgpnlnllgkrepevyghltldninrqliaqaeqasitldtfqsnwegaivd
  rihqaqtegvkliiinpaalthtsvalrdallgvaipfievhlsnvhareafrhhsylsd
  kaigvicglgakgysfaldyaiekiqpsnpn
  

  
  
• Chain 'I':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >5ibaI (I:)
  msstilvihgpnlnllgkrepevyghltldninrqliaqaeqasitldtfqsnwegaivd
  rihqaqtegvkliiinpaalthtsvalrdallgvaipfievhlsnvhareafrhhsylsd
  kaigvicglgakgysfaldyaiekiqpsnpn
  

  
  
• Chain 'J':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >5ibaJ (J:)
  msstilvihgpnlnllgkrepevyghltldninrqliaqaeqasitldtfqsnwegaivd
  rihqaqtegvkliiinpaalthtsvalrdallgvaipfievhlsnvhareafrhhsylsd
  kaigvicglgakgysfaldyaiekiqpsnpn
  

  
  
• Chain 'K':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >5ibaK (K:)
  msstilvihgpnlnllgkrepevyghltldninrqliaqaeqasitldtfqsnwegaivd
  rihqaqtegvkliiinpaalthtsvalrdallgvaipfievhlsnvhareafrhhsylsd
  kaigvicglgakgysfaldyaiekiqpsnpn
  

  
  
• Chain 'L':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >5ibaL (L:)
  msstilvihgpnlnllgkrepevyghltldninrqliaqaeqasitldtfqsnwegaivd
  rihqaqtegvkliiinpaalthtsvalrdallgvaipfievhlsnvhareafrhhsylsd
  kaigvicglgakgysfaldyaiekiqpsnpn