PDB entry 5hy9
View 5hy9 on RCSB PDB site
Description: Glycosylated, disulfide-linked Knob-into-Hole Fc fragment
Class: immune system
Keywords: Bispecific antibody Fc engineering Knob-into-Hole, Immune System
Deposited on
2016-02-01, released
2017-02-01
The last revision prior to the SCOPe 2.06 freeze date was dated
2017-02-01, with a file datestamp of
2017-01-26.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.16
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Ig gamma-1 chain C region
Species: Homo sapiens [TaxId:9606]
Gene: IGHG1
Database cross-references and differences (RAF-indexed):
- Uniprot P01857
- engineered mutation (133)
- engineered mutation (145)
Domains in SCOPe 2.06: d5hy9a1, d5hy9a2 - Chain 'B':
Compound: Ig gamma-1 chain C region
Species: Homo sapiens [TaxId:9606]
Gene: IGHG1
Database cross-references and differences (RAF-indexed):
- Uniprot P01857
- engineered mutation (128)
- engineered mutation (145)
- engineered mutation (147)
- engineered mutation (186)
Domains in SCOPe 2.06: d5hy9b1, d5hy9b2 - Heterogens: NAG, BMA, GAL, FUC, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5hy9A (A:)
dkthtcppcpapellggpsvflfppkpkdtlmisrtpevtcvvvdvshedpevkfnwyvd
gvevhnaktkpreeqynstyrvvsvltvlhqdwlngkeykckvsnkalpapiektiskak
gqprepqvytlppcrdeltknqvslwclvkgfypsdiavewesngqpennykttppvlds
dgsfflyskltvdksrwqqgnvfscsvmhealhnhytqkslslspgk
Sequence, based on observed residues (ATOM records): (download)
>5hy9A (A:)
gpsvflfppkpkdtlmisrtpevtcvvvdvshedpevkfnwyvdgvevhnaktkpreeqy
nstyrvvsvltvlhqdwlngkeykckvsnkalpapiektiskakgqprepqvytlppcrd
eltknqvslwclvkgfypsdiavewesngqpennykttppvldsdgsfflyskltvdksr
wqqgnvfscsvmhealhnhytqkslsl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5hy9B (B:)
dkthtcppcpapellggpsvflfppkpkdtlmisrtpevtcvvvdvshedpevkfnwyvd
gvevhnaktkpreeqynstyrvvsvltvlhqdwlngkeykckvsnkalpapiektiskak
gqprepqvctlppsrdeltknqvslscavkgfypsdiavewesngqpennykttppvlds
dgsfflvskltvdksrwqqgnvfscsvmhealhnhytqkslslspgk
Sequence, based on observed residues (ATOM records): (download)
>5hy9B (B:)
svflfppkpkdtlmisrtpevtcvvvdvshedpevkfnwyvdgvevhnaktkpnstyrvv
svltvlhqdwlngkeykckvsnkalpapiektiskakgqprepqvctlppsrdeltknqv
slscavkgfypsdiavewesngqpennykttppvldsdgsfflvskltvdksrwqqgnvf
scsvmhealhnhytqkslsl