PDB entry 5hkj
View 5hkj on RCSB PDB site
Description: Single Chain Recombinant Globular Head of the Complement System Protein C1q
Class: signaling protein
Keywords: gC1q domain, complement, C1q, signaling protein
Deposited on
2016-01-14, released
2016-03-02
The last revision prior to the SCOPe 2.07 freeze date was dated
2017-08-30, with a file datestamp of
2017-08-25.
Experiment type: XRAY
Resolution: 1.35 Å
R-factor: N/A
AEROSPACI score: 0.55
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Complement C1q subcomponent subunit A,Complement C1q subcomponent subunit C,Complement C1q subcomponent subunit B
Species: Homo sapiens [TaxId:9606]
Gene: C1QB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d5hkja1, d5hkja2, d5hkja3 - Heterogens: NAG, CA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5hkjA (A:)
kdqprpafsairrnppmggnvvifdtvitnqeepyqnhsgrfvctvpgyyyftfqvlsqw
eiclsivsssrgqvrrslgfcdttnkglfqvvsggmvlqlqqgdqvwvekdpkkghiyqg
seadsvfsgflifpsagsgkqkfqsvftvtrqthqppapnslirfnavltnpqgdydtst
gkftckvpglyyfvyhashtanlcvllyrsgvkvvtfcghtsktnqvnsggvllrlqvge
evwlavndyydmvgiqgsdsvfsgfllfpdgsakatqkiafsatrtinvplrrdqtirfd
hvitnmnnnyeprsgkftckvpglyyftyhassrgnlcvnlmrgreraqkvvtfcdyayn
tfqvttggmvlkleqgenvflqatdknsllgmegansifsgfllfpdmea
Sequence, based on observed residues (ATOM records): (download)
>5hkjA (A:)
dqprpafsairrnppmggnvvifdtvitnqeepyqnhsgrfvctvpgyyyftfqvlsqwe
iclsivsssrgqvrrslgfcdttnkglfqvvsggmvlqlqqgdqvwvekdpkkghiyqgs
eadsvfsgflifpsakfqsvftvtrqthqppapnslirfnavltnpqgdydtstgkftck
vpglyyfvyhashtanlcvllyrsgvkvvtfcghtsktnqvnsggvllrlqvgeevwlav
ndyydmvgiqgsdsvfsgfllfpdgsakatqkiafsatrtinvplrrdqtirfdhvitnm
nnnyeprsgkftckvpglyyftyhassrgnlcvnlmrgreraqkvvtfcdyayntfqvtt
ggmvlkleqgenvflqatdknsllgmegansifsgfllfpdm