PDB entry 5h4c
View 5h4c on RCSB PDB site
Description: Crystal structure of Cbln4
Class: protein binding
Keywords: C1q domain, C1q/TNF superfamily, neurexin, receptor specificity, synaptogenesis, PROTEIN BINDING
Deposited on
2016-10-31, released
2017-09-06
The last revision prior to the SCOPe 2.07 freeze date was dated
2017-09-20, with a file datestamp of
2017-09-15.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Protein Cbln4
Species: Rattus norvegicus [TaxId:10116]
Gene: Cbln4, LOC499947, rCG_40881
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d5h4ca_ - Chain 'B':
Compound: Protein Cbln4
Species: Rattus norvegicus [TaxId:10116]
Gene: Cbln4, LOC499947, rCG_40881
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d5h4cb_ - Chain 'C':
Compound: Protein Cbln4
Species: Rattus norvegicus [TaxId:10116]
Gene: Cbln4, LOC499947, rCG_40881
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d5h4cc_ - Heterogens: NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5h4cA (A:)
lqhhhhhhhhasqndtepivlegkclvvcdsnpatdskgssssplgisvraanskvafsa
vrstnhepsemsnktriiyfdqilvnvgnfftlesvfvaprkgiysfsfhvikvyqsqti
qvnlmlngkpvisafagdkdvtreaatngvllyldkedkvylklekgnllggwqystfsg
flvfpl
Sequence, based on observed residues (ATOM records): (download)
>5h4cA (A:)
nskvafsavrstnhepsemsnktriiyfdqilvnvgnfftlesvfvaprkgiysfsfhvi
kvyqsqtiqvnlmlngkpvisafagdkdvtreaatngvllyldkedkvylklekgnllgg
wqystfsgflvfpl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5h4cB (B:)
lqhhhhhhhhasqndtepivlegkclvvcdsnpatdskgssssplgisvraanskvafsa
vrstnhepsemsnktriiyfdqilvnvgnfftlesvfvaprkgiysfsfhvikvyqsqti
qvnlmlngkpvisafagdkdvtreaatngvllyldkedkvylklekgnllggwqystfsg
flvfpl
Sequence, based on observed residues (ATOM records): (download)
>5h4cB (B:)
anskvafsavrstnhepsemsnktriiyfdqilvnvgnfftlesvfvaprkgiysfsfhv
ikvyqsqtiqvnlmlngkpvisafagdkdvtreaatngvllyldkedkvylklekgnllg
gwqystfsgflvfpl
- Chain 'C':
Sequence, based on SEQRES records: (download)
>5h4cC (C:)
lqhhhhhhhhasqndtepivlegkclvvcdsnpatdskgssssplgisvraanskvafsa
vrstnhepsemsnktriiyfdqilvnvgnfftlesvfvaprkgiysfsfhvikvyqsqti
qvnlmlngkpvisafagdkdvtreaatngvllyldkedkvylklekgnllggwqystfsg
flvfpl
Sequence, based on observed residues (ATOM records): (download)
>5h4cC (C:)
anskvafsavrstnhemsnktriiyfdqilvnvgnfftlesvfvaprkgiysfsfhvikv
yqsqtiqvnlmlngkpvisafagdkdvtreaatngvllyldkedkvylklekgnllggwq
ystfsgflvfpl