PDB entry 5dtz

View 5dtz on RCSB PDB site
Description: Crystal structure of rsFolder in the fluorescent on-state
Class: fluorescent protein
Keywords: Fluorescent protein, GFP, reversibly switchable, cis chromophore
Deposited on 2015-09-18, released 2016-01-27
The last revision prior to the SCOPe 2.07 freeze date was dated 2016-01-27, with a file datestamp of 2016-01-22.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Green fluorescent protein
    Species: Aequorea victoria [TaxId:6100]
    Gene: GFP
    Database cross-references and differences (RAF-indexed):
    • Uniprot P42212 (25-End)
      • expression tag (23-24)
      • engineered mutation (53)
      • conflict (62)
      • conflict (87)
      • chromophore (88)
      • engineered mutation (90)
      • engineered mutation (101)
      • conflict (120)
      • conflict (126)
      • conflict (166)
      • conflict (174)
      • engineered mutation (184)
      • conflict (192)
      • engineered mutation (227)
    Domains in SCOPe 2.07: d5dtza1, d5dtza2
  • Chain 'B':
    Compound: Green fluorescent protein
    Species: Aequorea victoria [TaxId:6100]
    Gene: GFP
    Database cross-references and differences (RAF-indexed):
    • Uniprot P42212 (25-End)
      • expression tag (23-24)
      • engineered mutation (53)
      • conflict (62)
      • conflict (87)
      • chromophore (88)
      • engineered mutation (90)
      • engineered mutation (101)
      • conflict (120)
      • conflict (126)
      • conflict (166)
      • conflict (174)
      • engineered mutation (184)
      • conflict (192)
      • engineered mutation (227)
    Domains in SCOPe 2.07: d5dtzb1, d5dtzb2
  • Chain 'C':
    Compound: Green fluorescent protein
    Species: Aequorea victoria [TaxId:6100]
    Gene: GFP
    Database cross-references and differences (RAF-indexed):
    • Uniprot P42212 (25-End)
      • expression tag (22-24)
      • engineered mutation (53)
      • conflict (62)
      • conflict (87)
      • chromophore (88)
      • engineered mutation (90)
      • engineered mutation (101)
      • conflict (120)
      • conflict (126)
      • conflict (166)
      • conflict (174)
      • engineered mutation (184)
      • conflict (192)
      • engineered mutation (227)
    Domains in SCOPe 2.07: d5dtzc1, d5dtzc2
  • Chain 'D':
    Compound: Green fluorescent protein
    Species: Aequorea victoria [TaxId:6100]
    Gene: GFP
    Database cross-references and differences (RAF-indexed):
    • Uniprot P42212 (25-End)
      • expression tag (23-24)
      • engineered mutation (53)
      • conflict (62)
      • conflict (87)
      • chromophore (88)
      • engineered mutation (90)
      • engineered mutation (101)
      • conflict (120)
      • conflict (126)
      • conflict (166)
      • conflict (174)
      • engineered mutation (184)
      • conflict (192)
      • engineered mutation (227)
    Domains in SCOPe 2.07: d5dtzd1, d5dtzd2
  • Heterogens: PEG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5dtzA (A:)
mgsshhhhhhssglvprgshmatmvskgeelftgvvpilveldgdvnghkfsvrgegegd
atngkltlkficttgklpvpwptlvttlxvlcfsrypdhmkrhdffksampegyvqerti
sfkddgtyktraevkfegdtlvnrielkgidfkedgnilghkleynfnshnvyitadkqk
ngiksnfkirhnvedgsvqladhyqqntpigdgpvllpdnhylstqsklskdpnekrdhm
vllefvtaagithgmdelyk

    Sequence, based on observed residues (ATOM records): (download) 
    >5dtzA (A:)
mvskgeelftgvvpilveldgdvnghkfsvrgegegdatngkltlkficttgklpvpwpt
lvttlxvlcfsrypdhmkrhdffksampegyvqertisfkddgtyktraevkfegdtlvn
rielkgidfkedgnilghkleynfnshnvyitadkqkngiksnfkirhnvedgsvqladh
yqqntpigdgpvllpdnhylstqsklskdpnekrdhmvllefvtaagithg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5dtzB (B:)
mgsshhhhhhssglvprgshmatmvskgeelftgvvpilveldgdvnghkfsvrgegegd
atngkltlkficttgklpvpwptlvttlxvlcfsrypdhmkrhdffksampegyvqerti
sfkddgtyktraevkfegdtlvnrielkgidfkedgnilghkleynfnshnvyitadkqk
ngiksnfkirhnvedgsvqladhyqqntpigdgpvllpdnhylstqsklskdpnekrdhm
vllefvtaagithgmdelyk

    Sequence, based on observed residues (ATOM records): (download) 
    >5dtzB (B:)
mvskgeelftgvvpilveldgdvnghkfsvrgegegdatngkltlkficttgklpvpwpt
lvttlxvlcfsrypdhmkrhdffksampegyvqertisfkddgtyktraevkfegdtlvn
rielkgidfkedgnilghkleynfnshnvyitadkqkngiksnfkirhnvedgsvqladh
yqqntpigdgpvllpdnhylstqsklskdpnekrdhmvllefvtaagith

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5dtzC (C:)
mgsshhhhhhssglvprgshmatmvskgeelftgvvpilveldgdvnghkfsvrgegegd
atngkltlkficttgklpvpwptlvttlxvlcfsrypdhmkrhdffksampegyvqerti
sfkddgtyktraevkfegdtlvnrielkgidfkedgnilghkleynfnshnvyitadkqk
ngiksnfkirhnvedgsvqladhyqqntpigdgpvllpdnhylstqsklskdpnekrdhm
vllefvtaagithgmdelyk

    Sequence, based on observed residues (ATOM records): (download) 
    >5dtzC (C:)
tmvskgeelftgvvpilveldgdvnghkfsvrgegegdatngkltlkficttgklpvpwp
tlvttlxvlcfsrypdhmkrhdffksampegyvqertisfkddgtyktraevkfegdtlv
nrielkgidfkedgnilghkleynfnshnvyitadkqkngiksnfkirhnvedgsvqlad
hyqqntpigdgpvllpdnhylstqsklskdpnekrdhmvllefvtaagith

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5dtzD (D:)
mgsshhhhhhssglvprgshmatmvskgeelftgvvpilveldgdvnghkfsvrgegegd
atngkltlkficttgklpvpwptlvttlxvlcfsrypdhmkrhdffksampegyvqerti
sfkddgtyktraevkfegdtlvnrielkgidfkedgnilghkleynfnshnvyitadkqk
ngiksnfkirhnvedgsvqladhyqqntpigdgpvllpdnhylstqsklskdpnekrdhm
vllefvtaagithgmdelyk

    Sequence, based on observed residues (ATOM records): (download) 
    >5dtzD (D:)
mvskgeelftgvvpilveldgdvnghkfsvrgegegdatngkltlkficttgklpvpwpt
lvttlxvlcfsrypdhmkrhdffksampegyvqertisfkddgtyktraevkfegdtlvn
rielkgidfkedgnilghkleynfnshnvyitadkqkngiksnfkirhnvedgsvqladh
yqqntpigdgpvllpdnhylstqsklskdpnekrdhmvllefvtaagith