PDB entry 5de0

View 5de0 on RCSB PDB site
Description: Dye-decolorizing protein from V. cholerae
Class: oxidoreductase
Keywords: heme complex, OXIDOREDUCTASE
Deposited on 2015-08-25, released 2015-10-21
The last revision prior to the SCOPe 2.07 freeze date was dated 2015-11-11, with a file datestamp of 2015-11-06.
Experiment type: XRAY
Resolution: 2.24 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Deferrochelatase
    Species: Vibrio cholerae [TaxId:666]
    Gene: DN30_2082, VC39_07860, VC78_07860, VS27_03965, WG08_01515
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5de0a_
  • Chain 'B':
    Compound: Deferrochelatase
    Species: Vibrio cholerae [TaxId:666]
    Gene: DN30_2082, VC39_07860, VC78_07860, VS27_03965, WG08_01515
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5de0b_
  • Chain 'C':
    Compound: Deferrochelatase
    Species: Vibrio cholerae [TaxId:666]
    Gene: DN30_2082, VC39_07860, VC78_07860, VS27_03965, WG08_01515
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5de0c_
  • Chain 'D':
    Compound: Deferrochelatase
    Species: Vibrio cholerae [TaxId:666]
    Gene: DN30_2082, VC39_07860, VC78_07860, VS27_03965, WG08_01515
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5de0d_
  • Heterogens: HEM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5de0A (A:)
gphmfksqtailpeagpfalytllkvrqnhahvlqalkalpalveeinqnqpgaeltvsv
afskgfwshfemasppelidfpelgegethapstdvdvlihchatrhdllfytlrkgisd
iaqdieivdetygfryldardmtgfidgtenpkaekraevalvadgdfaggsyvmvqrfv
hnlpawnrlnlaaqekvigrtkpdsvelenvpaashvgrvdikeegkglkivrhslpygs
vsgdhgllfiaychtlhnfktmlesmygvtdgktdqllrftkavtgayffapsqvmlqel
tlknq

    Sequence, based on observed residues (ATOM records): (download) 
    >5de0A (A:)
ksqtailpeagpfalytllkvrqnhahvlqalkalpalveeinqnqpgaeltvsvafskg
fwshfemasppelidfpelgegethapstdvdvlihchatrhdllfytlrkgisdiaqdi
eivdetygfryldardmtgfidgtenpkaekraevalvadgdfaggsyvmvqrfvhnlpa
wnrlnlaaqekvigrtkpdsvelenvpaashvgrvdikeegkglkivrhslpygsvsgdh
gllfiaychtlhnfktmlesmygvtdgktdqllrftkavtgayffapsqvmlqelt

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5de0B (B:)
gphmfksqtailpeagpfalytllkvrqnhahvlqalkalpalveeinqnqpgaeltvsv
afskgfwshfemasppelidfpelgegethapstdvdvlihchatrhdllfytlrkgisd
iaqdieivdetygfryldardmtgfidgtenpkaekraevalvadgdfaggsyvmvqrfv
hnlpawnrlnlaaqekvigrtkpdsvelenvpaashvgrvdikeegkglkivrhslpygs
vsgdhgllfiaychtlhnfktmlesmygvtdgktdqllrftkavtgayffapsqvmlqel
tlknq

    Sequence, based on observed residues (ATOM records): (download) 
    >5de0B (B:)
ksqtailpeagpfalytllkvrqnhahvlqalkalpalveeinqnqpgaeltvsvafskg
fwshfemasppelidfpelgegethapstdvdvlihchatrhdllfytlrkgisdiaqdi
eivdetygfryldardmtgfidgtenpkaekraevalvadgdfaggsyvmvqrfvhnlpa
wnrlnlaaqekvigrtkpdsvelenvpaashvgrvdikeegkglkivrhslpygsvsgdh
gllfiaychtlhnfktmlesmygvtdgktdqllrftkavtgayffapsqvmlqeltlk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5de0C (C:)
gphmfksqtailpeagpfalytllkvrqnhahvlqalkalpalveeinqnqpgaeltvsv
afskgfwshfemasppelidfpelgegethapstdvdvlihchatrhdllfytlrkgisd
iaqdieivdetygfryldardmtgfidgtenpkaekraevalvadgdfaggsyvmvqrfv
hnlpawnrlnlaaqekvigrtkpdsvelenvpaashvgrvdikeegkglkivrhslpygs
vsgdhgllfiaychtlhnfktmlesmygvtdgktdqllrftkavtgayffapsqvmlqel
tlknq

    Sequence, based on observed residues (ATOM records): (download) 
    >5de0C (C:)
ksqtailpeagpfalytllkvrqnhahvlqalkalpalveeinqnqpgaeltvsvafskg
fwshfemasppelidfpelgegethapstdvdvlihchatrhdllfytlrkgisdiaqdi
eivdetygfryldardmtgfidgtenpkaekraevalvadgdfaggsyvmvqrfvhnlpa
wnrlnlaaqekvigrtkpdsvelenvpaashvgrvdikeegkglkivrhslpygsvsgdh
gllfiaychtlhnfktmlesmygvtdgktdqllrftkavtgayffapsqvmlqeltl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5de0D (D:)
gphmfksqtailpeagpfalytllkvrqnhahvlqalkalpalveeinqnqpgaeltvsv
afskgfwshfemasppelidfpelgegethapstdvdvlihchatrhdllfytlrkgisd
iaqdieivdetygfryldardmtgfidgtenpkaekraevalvadgdfaggsyvmvqrfv
hnlpawnrlnlaaqekvigrtkpdsvelenvpaashvgrvdikeegkglkivrhslpygs
vsgdhgllfiaychtlhnfktmlesmygvtdgktdqllrftkavtgayffapsqvmlqel
tlknq

    Sequence, based on observed residues (ATOM records): (download) 
    >5de0D (D:)
sqtailpeagpfalytllkvrqnhahvlqalkalpalveeinqnqpgaeltvsvafskgf
wshfemasppelidfpelgegethapstdvdvlihchatrhdllfytlrkgisdiaqdie
ivdetygfryldardmtgfidgtenpkaekraevalvadgdfaggsyvmvqrfvhnlpaw
nrlnlaaqekvigrtkpdsvelenvpaashvgrvdikeegkglkivrhslpygsvsgdhg
llfiaychtlhnfktmlesmygvtdgktdqllrftkavtgayffapsqvmlqeltl