PDB entry 5cpd

View 5cpd on RCSB PDB site
Description: Methionine-alanine complex structure of peptide deformylase from Xanthomonas oryzae pv. oryzae
Class: hydrolase
Keywords: Methionine-alanine complex, peptide deformylase, Xanthomonas, HYDROLASE
Deposited on 2015-07-21, released 2016-08-03
The last revision prior to the SCOPe 2.07 freeze date was dated 2016-08-03, with a file datestamp of 2016-07-29.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peptide deformylase
    Species: Xanthomonas oryzae pv. oryzae KACC10331 [TaxId:291331]
    Gene: def, XOO1075
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5cpda_
  • Heterogens: CD, ACT, NA, GOL, MET, ALA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5cpdA (A:)
mirdiirmgdkrllrvapqvtnlgsaelhalvsdmfetmgaahgvglaapqiavdlqlmv
fgfeaserypeapavpltalanaqieplsdemengwegclsipglravipryryiryrgf
apdgspiereaegfharvvqheydhlvgrlypsrienfdtfgfddvlsydl

    Sequence, based on observed residues (ATOM records): (download) 
    >5cpdA (A:)
mirdiirmgdkrllrvapqvtnlgsaelhalvsdmfetmgaahgvglaapqiavdlqlmv
fgfeaserypeapavpltalanaqieplsdemengwegclsipglravipryryiryrgf
apdgspiereaegfharvvqheydhlvgrlypsrienfdtfgfddvls