PDB entry 5byu

View 5byu on RCSB PDB site
Description: Crystal structure of unnamed thioesterase Ipg2867 from Legionella pneumophila
Class: hydrolase
Keywords: Thioesterase, hotdog fold, 4HBT, HYDROLASE
Deposited on 2015-06-11, released 2015-06-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2015-06-24, with a file datestamp of 2015-06-19.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: thioesterase
    Species: Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) [TaxId:272624]
    Gene: lpg2867
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5byua_
  • Chain 'B':
    Compound: thioesterase
    Species: Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) [TaxId:272624]
    Gene: lpg2867
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5byub_
  • Chain 'C':
    Compound: thioesterase
    Species: Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) [TaxId:272624]
    Gene: lpg2867
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5byuc_
  • Chain 'D':
    Compound: thioesterase
    Species: Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) [TaxId:272624]
    Gene: lpg2867
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5byud_
  • Chain 'E':
    Compound: thioesterase
    Species: Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) [TaxId:272624]
    Gene: lpg2867
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5byue_
  • Chain 'F':
    Compound: thioesterase
    Species: Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) [TaxId:272624]
    Gene: lpg2867
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5byuf_
  • Chain 'G':
    Compound: thioesterase
    Species: Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) [TaxId:272624]
    Gene: lpg2867
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5byug_
  • Chain 'H':
    Compound: thioesterase
    Species: Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) [TaxId:272624]
    Gene: lpg2867
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5byuh_
  • Heterogens: COA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5byuA (A:)
snamteinkiihkktfdiawgdmdalghvnnaryfdyfqearidwlreldikmtgqtgpv
vihvactflkpivypatvtihskvnslgnssmimdhdlyqeetlmaqgvskivwidytqn
ksvplpdiirnlv

    Sequence, based on observed residues (ATOM records): (download) 
    >5byuA (A:)
einkiihkktfdiawgdmdalghvnnaryfdyfqearidwlreldikmtgqtgpvvihva
ctflkpivypatvtihskvnslgnssmimdhdlyqeetlmaqgvskivwidytqnksvpl
pdiirnlv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5byuB (B:)
snamteinkiihkktfdiawgdmdalghvnnaryfdyfqearidwlreldikmtgqtgpv
vihvactflkpivypatvtihskvnslgnssmimdhdlyqeetlmaqgvskivwidytqn
ksvplpdiirnlv

    Sequence, based on observed residues (ATOM records): (download) 
    >5byuB (B:)
einkiihkktfdiawgdmdalghvnnaryfdyfqearidwlreldikmtgqtgpvvihva
ctflkpivypatvtihskvnslgnssmimdhdlyqeetlmaqgvskivwidytqnksvpl
pdiirnlv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5byuC (C:)
snamteinkiihkktfdiawgdmdalghvnnaryfdyfqearidwlreldikmtgqtgpv
vihvactflkpivypatvtihskvnslgnssmimdhdlyqeetlmaqgvskivwidytqn
ksvplpdiirnlv

    Sequence, based on observed residues (ATOM records): (download) 
    >5byuC (C:)
ihkktfdiawgdmdalghvnnaryfdyfqearidwlreldikmtgqtgpvvihvactflk
pivypatvtihskvnslgnssmimdhdlyqeetlmaqgvskivwidytqnksvplpdiir
nlv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5byuD (D:)
snamteinkiihkktfdiawgdmdalghvnnaryfdyfqearidwlreldikmtgqtgpv
vihvactflkpivypatvtihskvnslgnssmimdhdlyqeetlmaqgvskivwidytqn
ksvplpdiirnlv

    Sequence, based on observed residues (ATOM records): (download) 
    >5byuD (D:)
hkktfdiawgdmdalghvnnaryfdyfqearidwlreldikmtgqtgpvvihvactflkp
ivypatvtihskvnslgnssmimdhdlyqeetlmaqgvskivw

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >5byuE (E:)
snamteinkiihkktfdiawgdmdalghvnnaryfdyfqearidwlreldikmtgqtgpv
vihvactflkpivypatvtihskvnslgnssmimdhdlyqeetlmaqgvskivwidytqn
ksvplpdiirnlv

    Sequence, based on observed residues (ATOM records): (download) 
    >5byuE (E:)
ihkktfdiawgdmdalghvnnaryfdyfqearidwlreldikmtgqtgpvvihvactflk
pivypatvtihskvnslgnssmimdhdlyqeetlmaqgvskivwidytqnksvplpdiir
nl

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >5byuF (F:)
snamteinkiihkktfdiawgdmdalghvnnaryfdyfqearidwlreldikmtgqtgpv
vihvactflkpivypatvtihskvnslgnssmimdhdlyqeetlmaqgvskivwidytqn
ksvplpdiirnlv

    Sequence, based on observed residues (ATOM records): (download) 
    >5byuF (F:)
hkktfdiawgdmdalghvnnaryfdyfqearidwlreldikmtgqtgpvvihvactflkp
ivypatvtihskvnslgnssmimdhdlyqeetlmaqgvskivwidytqnksvplpdiir

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >5byuG (G:)
snamteinkiihkktfdiawgdmdalghvnnaryfdyfqearidwlreldikmtgqtgpv
vihvactflkpivypatvtihskvnslgnssmimdhdlyqeetlmaqgvskivwidytqn
ksvplpdiirnlv

    Sequence, based on observed residues (ATOM records): (download) 
    >5byuG (G:)
inkiihkktfdiawgdmdalghvnnaryfdyfqearidwlreldikmtgqtgpvvihvac
tflkpivypatvtihskvnslgnssmimdhdlyqeetlmaqgvskivwidytqnksvplp
diirnlv

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >5byuH (H:)
snamteinkiihkktfdiawgdmdalghvnnaryfdyfqearidwlreldikmtgqtgpv
vihvactflkpivypatvtihskvnslgnssmimdhdlyqeetlmaqgvskivwidytqn
ksvplpdiirnlv

    Sequence, based on observed residues (ATOM records): (download) 
    >5byuH (H:)
einkiihkktfdiawgdmdalghvnnaryfdyfqearidwlreldikmtgqtgpvvihva
ctflkpivypatvtihskvnslgnssmimdhdlyqeetlmaqgvskivwidytqnksvpl
pdiirnlv