PDB entry 4ttd

View 4ttd on RCSB PDB site
Description: Structure of a lysozyme antibody complex
Class: immune system
Keywords: Immune system, affinity maturation
Deposited on 2014-06-20, released 2015-07-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2015-07-15, with a file datestamp of 2015-07-10.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Lysozyme C
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4ttda_
  • Chain 'B':
    Compound: Lysozyme C
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4ttdb_
  • Chain 'C':
    Compound: Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 4TTD
    Domains in SCOPe 2.08: d4ttdc_
  • Chain 'D':
    Compound: Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 4TTD (0-End)
    Domains in SCOPe 2.08: d4ttdd1, d4ttdd2
  • Chain 'H':
    Compound: Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 4TTD (0-End)
    Domains in SCOPe 2.08: d4ttdh_
  • Chain 'L':
    Compound: Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 4TTD (0-End)
    Domains in SCOPe 2.08: d4ttdl1, d4ttdl2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4ttdA (A:)
kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
qawirgcrl

    Sequence, based on observed residues (ATOM records): (download) 
    >4ttdA (A:)
kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
qawirgc

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4ttdB (B:)
kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
qawirgcrl

    Sequence, based on observed residues (ATOM records): (download) 
    >4ttdB (B:)
kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
qawirgc

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4ttdC (C:)
qvqlvesggglvqpggplrlscaasgftissnymswvrqapgkglewvsaiysggstyya
dsvkgrftisrdnskntlylqmnslraedtavyycaregpgdsivywgkgtlvtvssast
kgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgly
slssvvtvpssslgtqtyicnvnhkpsntkvdkrvepksdck

    Sequence, based on observed residues (ATOM records): (download) 
    >4ttdC (C:)
vqlvesggglvqpggplrlscaasgftissnymswvrqapgkglewvsaiysggstyyad
svkgrftisrdnskntlylqmnslraedtavyycaregpgdsivywgkgtlvtvssastk
gpsvfplapssggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslssv
vtvpssslgtqtyicnvnhkpsntkvdkrvep

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4ttdD (D:)
qsvltqppsvsgapgqrvsisctgrssnigagydvhwyqqlpgkapklliygntnrpsgv
pvrfsgsksgtsaslaitglqaedeadyycqsydsslrgsvfgggtkltvlgqpkaapsv
tlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaas
sylsltpeqwkshrsyscqvthegstvektvaptecs

    Sequence, based on observed residues (ATOM records): (download) 
    >4ttdD (D:)
qsvltqppsvsgapgqrvsisctgrssnigagydvhwyqqlpgkapklliygntnrpsgv
pvrfsgsksgtsaslaitglqaedeadyycqsydsslrgsvfgggtkltvlgqpkaapsv
tlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaas
sylsltpeqwkshrsyscqvthegstvektvapt

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >4ttdH (H:)
qvqlvesggglvqpggplrlscaasgftissnymswvrqapgkglewvsaiysggstyya
dsvkgrftisrdnskntlylqmnslraedtavyycaregpgdsivywgkgtlvtvssast
kgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgly
slssvvtvpssslgtqtyicnvnhkpsntkvdkrvepksdck

    Sequence, based on observed residues (ATOM records): (download) 
    >4ttdH (H:)
qvqlvesggglvqpggplrlscaasgftissnymswvrqapgkglewvsaiysggstyya
dsvkgrftisrdnskntlylqmnslraedtavyycaregpgdsivywgkgtlvtvssast
kgpsvfplapssggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslss
vvtvpssslgtqtyicnvnhkpsntkvdkrvepksd

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >4ttdL (L:)
qsvltqppsvsgapgqrvsisctgrssnigagydvhwyqqlpgkapklliygntnrpsgv
pvrfsgsksgtsaslaitglqaedeadyycqsydsslrgsvfgggtkltvlgqpkaapsv
tlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaas
sylsltpeqwkshrsyscqvthegstvektvaptecs

    Sequence, based on observed residues (ATOM records): (download) 
    >4ttdL (L:)
qsvltqppsvsgapgqrvsisctgrssnigagydvhwyqqlpgkapklliygntnrpsgv
pvrfsgsksgtsaslaitglqaedeadyycqsydsslrgsvfgggtkltvlgqpkaapsv
tlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaas
sylsltpeqwkshrsyscqvthegstvektvapt