PDB entry 4rrf

View 4rrf on RCSB PDB site
Description: Editing domain of threonyl-tRNA synthetase from Methanococcus jannaschii with L-Ser3AA
Class: ligase
Keywords: DTD-like fold, Proofreading, LIGASE
Deposited on 2014-11-06, released 2015-07-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-22, with a file datestamp of 2017-11-17.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Threonine--tRNA ligase
    Species: Methanocaldococcus jannaschii [TaxId:243232]
    Gene: thrS, MJ1197
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4rrfa_
  • Chain 'B':
    Compound: Threonine--tRNA ligase
    Species: Methanocaldococcus jannaschii [TaxId:243232]
    Gene: thrS, MJ1197
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4rrfb_
  • Chain 'C':
    Compound: Threonine--tRNA ligase
    Species: Methanocaldococcus jannaschii [TaxId:243232]
    Gene: thrS, MJ1197
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4rrfc_
  • Chain 'D':
    Compound: Threonine--tRNA ligase
    Species: Methanocaldococcus jannaschii [TaxId:243232]
    Gene: thrS, MJ1197
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4rrfd_
  • Chain 'E':
    Compound: Threonine--tRNA ligase
    Species: Methanocaldococcus jannaschii [TaxId:243232]
    Gene: thrS, MJ1197
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4rrfe_
  • Chain 'F':
    Compound: Threonine--tRNA ligase
    Species: Methanocaldococcus jannaschii [TaxId:243232]
    Gene: thrS, MJ1197
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4rrff_
  • Heterogens: A3S, CL, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4rrfA (A:)
mkmllihsdylefeakektkiaeetenlkgkldeclacfiaveredennpegtaigavee
iekvanqlkvnnivvypyahlssdlsspetavkvlkdiesilkergynvlrapfgwykaf
kisckghplselsrkivakee

    Sequence, based on observed residues (ATOM records): (download) 
    >4rrfA (A:)
mkmllihsdylefeakektkiaeetenlkgkldeclacfiaveredennpegtaigavee
iekvanqlkvnnivvypyahlssdlsspetavkvlkdiesilkergynvlrapfgwykaf
kisckghplselsrkiva

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4rrfB (B:)
mkmllihsdylefeakektkiaeetenlkgkldeclacfiaveredennpegtaigavee
iekvanqlkvnnivvypyahlssdlsspetavkvlkdiesilkergynvlrapfgwykaf
kisckghplselsrkivakee

    Sequence, based on observed residues (ATOM records): (download) 
    >4rrfB (B:)
mkmllihsdylefeakektkiaeetenlkgkldeclacfiaveredennpegtaigavee
iekvanqlkvnnivvypyahlssdlsspetavkvlkdiesilkergynvlrapfgwykaf
kisckghplselsrkiv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4rrfC (C:)
mkmllihsdylefeakektkiaeetenlkgkldeclacfiaveredennpegtaigavee
iekvanqlkvnnivvypyahlssdlsspetavkvlkdiesilkergynvlrapfgwykaf
kisckghplselsrkivakee

    Sequence, based on observed residues (ATOM records): (download) 
    >4rrfC (C:)
mkmllihsdylefeakektkiaeetenlkgkldeclacfiaveredennpegtaigavee
iekvanqlkvnnivvypyahlssdlsspetavkvlkdiesilkergynvlrapfgwykaf
kisckghplselsrkivak

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4rrfD (D:)
mkmllihsdylefeakektkiaeetenlkgkldeclacfiaveredennpegtaigavee
iekvanqlkvnnivvypyahlssdlsspetavkvlkdiesilkergynvlrapfgwykaf
kisckghplselsrkivakee

    Sequence, based on observed residues (ATOM records): (download) 
    >4rrfD (D:)
mkmllihsdylefeakektkiaeetenlkgkldeclacfiaveredennpegtaigavee
iekvanqlkvnnivvypyahlssdlsspetavkvlkdiesilkergynvlrapfgwykaf
kisckghplselsrkivak

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4rrfE (E:)
mkmllihsdylefeakektkiaeetenlkgkldeclacfiaveredennpegtaigavee
iekvanqlkvnnivvypyahlssdlsspetavkvlkdiesilkergynvlrapfgwykaf
kisckghplselsrkivakee

    Sequence, based on observed residues (ATOM records): (download) 
    >4rrfE (E:)
mkmllihsdylefeakektkiaeetenlkgkldeclacfiaveredennpegtaigavee
iekvanqlkvnnivvypyahlssdlsspetavkvlkdiesilkergynvlrapfgwykaf
kisckghplselsrkivake

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4rrfF (F:)
mkmllihsdylefeakektkiaeetenlkgkldeclacfiaveredennpegtaigavee
iekvanqlkvnnivvypyahlssdlsspetavkvlkdiesilkergynvlrapfgwykaf
kisckghplselsrkivakee

    Sequence, based on observed residues (ATOM records): (download) 
    >4rrfF (F:)
mkmllihsdylefeakektkiaeetenlkgkldeclacfiaveredennpegtaigavee
iekvanqlkvnnivvypyahlssdlsspetavkvlkdiesilkergynvlrapfgwykaf
kisckghplselsrkivake