PDB entry 4rij

View 4rij on RCSB PDB site
Description: Crystal structure of the mtb phosphoenolpyruvate carboxykinase(pepck) in complex with gdp and metals
Class: lyase
Keywords: GTP-dependent pepck, rate-limiting gluconeogenic enzyme, kinase, phosphoryl transfer, GTP, metal binding, lyase
Deposited on 2014-10-06, released 2015-12-09
Made obsolete on 2016-03-30

The last revision prior to the SCOPe 2.08 freeze date was dated 2019-09-04, with a file datestamp of 2019-08-30.
Experiment type: XRAY
Resolution: 2.12 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phosphoenolpyruvate carboxykinase [GTP]
    Species: Mycobacterium tuberculosis H37Rv [TaxId:83332]
    Gene: P425_00220, pckG, RVBD_0211
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4rija1, d4rija2
  • Heterogens: GDP, GOL, MN, ZN, PO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4rijA (A:)
hhhhhhssglvpagshmtsatipgldtaptnhqgllswveevaeltqpdrvvftdgseee
fqrlcdqlveagtfirlnpekhknsylalsdpsdvarvesrtyicsakeidagptnnwmd
pgemrsimkdlyrgcmrgrtmyvvpfcmgplgaedpklgveitdseyvvvsmrtmtrmgk
aalekmgddgffvkalhsvgaplepgqkdvawpcsetkyithfpetreiwsygsgyggna
llgkkcyslriasamahdegwlaehmlilklispenkayyfaaafpsacgktnlamlqpt
ipgwraetlgddiawmrfgkdgrlyavnpefgffgvapgtnwksnpnamrtiaagntvft
nvaltddgdvwweglegdpqhlidwkgndwyfretetnaahpnsryctpmsqcpilapew
ddpqgvpisgilfggrrkttvplvteardwqhgvfigatlgseqtaaaegkvgnvrrdpm
amlpflgynvgdyfqhwinlgkhadesklpkvffvnwfrrgddgrflwpgfgensrvlkw
ivdriehkaggattpigtvpavedldldgldvdaadvaaalavdadewrqelplieewlq
fvgeklptgvkdefdalkerlg

    Sequence, based on observed residues (ATOM records): (download) 
    >4rijA (A:)
aptnhqgllswveevaeltqpdrvvftdgseeefqrlcdqlveagtfirlnpekhknsyl
alsdpsdvarvesrtyicsakeidagptnnwmdpgemrsimkdlyrgcmrgrtmyvvpfc
mgplgaedpklgveitdseyvvvsmrtmtrmgkaalekmgddgffvkalhsvgaplepgq
kdvawpcsetkyithfpetreiwsygsgyggnallgkkcyslriasamahdegwlaehml
ilklispenkayyfaaafpsacgktnlamlqptipgwraetlgddiawmrfgkdgrlyav
npefgffgvapgtnwksnpnamrtiaagntvftnvaltddgdvwweglegdpqhlidwkg
ndwyfretetnaahpnsryctpmsqcpilapewddpqgvpisgilfggrrkttvplvtea
rdwqhgvfigatlgseqtaaaegkvgnvrrdpmamlpflgynvgdyfqhwinlgkhades
klpkvffvnwfrrgddgrflwpgfgensrvlkwivdriehkaggattpigtvpavedldl
dgldvdaadvaaalavdadewrqelplieewlqfvgeklptgvkdefdalkerlg