PDB entry 4pzo

View 4pzo on RCSB PDB site
Description: Crystal structure of PHC3 SAM L967R
Class: DNA binding protein
Keywords: SAM domain, Polycomb group, polymer, chromatin, DNA BINDING PROTEIN
Deposited on 2014-03-31, released 2014-07-30
The last revision prior to the SCOPe 2.04 freeze date was dated 2014-07-30, with a file datestamp of 2014-07-25.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: 0.284
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Polyhomeotic-like protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: EDR3, PH3, PHC3
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8NDX5 (5-74)
      • engineered mutation (58)
      • expression tag (75)
    Domains in SCOPe 2.04: d4pzoa_
  • Chain 'B':
    Compound: Polyhomeotic-like protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: EDR3, PH3, PHC3
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8NDX5 (5-74)
      • expression tag (4)
      • engineered mutation (58)
    Domains in SCOPe 2.04: d4pzob_
  • Chain 'C':
    Compound: Polyhomeotic-like protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: EDR3, PH3, PHC3
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8NDX5 (5-End)
      • expression tag (3-4)
      • engineered mutation (58)
    Domains in SCOPe 2.04: d4pzoc_
  • Chain 'D':
    Compound: Polyhomeotic-like protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: EDR3, PH3, PHC3
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8NDX5 (5-74)
      • engineered mutation (58)
    Domains in SCOPe 2.04: d4pzod_
  • Chain 'E':
    Compound: Polyhomeotic-like protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: EDR3, PH3, PHC3
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8NDX5 (5-74)
      • expression tag (3-4)
      • engineered mutation (58)
    Domains in SCOPe 2.04: d4pzoe_
  • Chain 'F':
    Compound: Polyhomeotic-like protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: EDR3, PH3, PHC3
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8NDX5 (5-74)
      • expression tag (4)
      • engineered mutation (58)
    Domains in SCOPe 2.04: d4pzof_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4pzoA (A:)
mektrtepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamnikrg
palkicarinslkesrhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4pzoA (A:)
tepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamnikrgpalki
carinslkesr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4pzoB (B:)
mektrtepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamnikrg
palkicarinslkesrhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4pzoB (B:)
rtepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamnikrgpalk
icarinslkes

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4pzoC (C:)
mektrtepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamnikrg
palkicarinslkesrhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4pzoC (C:)
trtepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamnikrgpal
kicarinslke

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4pzoD (D:)
mektrtepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamnikrg
palkicarinslkesrhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4pzoD (D:)
tepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamnikrgpalki
carinslkes

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4pzoE (E:)
mektrtepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamnikrg
palkicarinslkesrhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4pzoE (E:)
trtepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamnikrgpal
kicarinslkes

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4pzoF (F:)
mektrtepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamnikrg
palkicarinslkesrhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4pzoF (F:)
rtepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamnikrgpalk
icarinslkes