PDB entry 4pzn

View 4pzn on RCSB PDB site
Description: Crystal structure of PHC3 SAM L971E
Class: DNA binding protein
Keywords: SAM domain, Polycomb group, polymer, chromatin, DNA BINDING PROTEIN
Deposited on 2014-03-31, released 2014-07-30
The last revision prior to the SCOPe 2.06 freeze date was dated 2014-10-15, with a file datestamp of 2014-10-10.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.209
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Polyhomeotic-like protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: EDR3, PH3, PHC3
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8NDX5 (5-74)
      • engineered mutation (62)
    Domains in SCOPe 2.06: d4pzna_
  • Chain 'B':
    Compound: Polyhomeotic-like protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: EDR3, PH3, PHC3
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8NDX5 (5-End)
      • engineered mutation (62)
    Domains in SCOPe 2.06: d4pznb_
  • Chain 'C':
    Compound: Polyhomeotic-like protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: EDR3, PH3, PHC3
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8NDX5 (5-End)
      • expression tag (4)
      • engineered mutation (62)
    Domains in SCOPe 2.06: d4pznc1, d4pznc2
  • Chain 'D':
    Compound: Polyhomeotic-like protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: EDR3, PH3, PHC3
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8NDX5 (5-End)
      • engineered mutation (62)
    Domains in SCOPe 2.06: d4pznd_
  • Chain 'E':
    Compound: Polyhomeotic-like protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: EDR3, PH3, PHC3
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8NDX5
      • engineered mutation (62)
    Domains in SCOPe 2.06: d4pzne_
  • Heterogens: EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4pznA (A:)
mektrtepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamniklg
paekicarinslkesrhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4pznA (A:)
tepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamniklgpaeki
carinslkes

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4pznB (B:)
mektrtepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamniklg
paekicarinslkesrhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4pznB (B:)
tepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamniklgpaeki
carinslke

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4pznC (C:)
mektrtepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamniklg
paekicarinslkesrhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4pznC (C:)
rtepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamniklgpaek
icarinslke

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4pznD (D:)
mektrtepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamniklg
paekicarinslkesrhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4pznD (D:)
tepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamniklgpaeki
carinslke

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4pznE (E:)
mektrtepsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamniklg
paekicarinslkesrhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4pznE (E:)
epsiwtvddvwafihslpgcqdiadefraqeidgqallllkedhlmsamniklgpaekic
arinslk