PDB entry 4pji
View 4pji on RCSB PDB site
Description: Structure of human MR1-Ac-6-FP in complex with human MAIT C-C10 TCR
Class: Immune System
Keywords: MR1, TCR, Immune complex, Ac-6-FP, Immune System
Deposited on
2014-05-12, released
2014-07-02
The last revision prior to the SCOPe 2.04 freeze date was dated
2014-07-02, with a file datestamp of
2014-06-27.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.19
AEROSPACI score: 0.27
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Major histocompatibility complex class I-related gene protein
Species: Homo sapiens [TaxId:9606]
Gene: MR1
Database cross-references and differences (RAF-indexed):
- Uniprot Q95460 (1-End)
- engineered mutation (261)
- Chain 'B':
Compound: Beta-2-microglobulin
Species: Homo sapiens [TaxId:9606]
Gene: B2M, CDABP0092, HDCMA22P
Database cross-references and differences (RAF-indexed):
- Uniprot P61769 (1-End)
- initiating methionine (0)
Domains in SCOPe 2.04: d4pjib_ - Chain 'C':
Compound: Major histocompatibility complex class I-related gene protein
Species: Homo sapiens [TaxId:9606]
Gene: MR1
Database cross-references and differences (RAF-indexed):
- Uniprot Q95460 (1-End)
- engineered mutation (261)
- Chain 'D':
Compound: Beta-2-microglobulin
Species: Homo sapiens [TaxId:9606]
Gene: B2M, CDABP0092, HDCMA22P
Database cross-references and differences (RAF-indexed):
- Uniprot P61769 (1-End)
- initiating methionine (0)
Domains in SCOPe 2.04: d4pjid_ - Chain 'E':
Compound: TCR-alpha
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4pjie1, d4pjie2 - Chain 'F':
Compound: TCR-beta
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'G':
Compound: TCR-alpha
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: TCR-beta
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4pjih1, d4pjih2 - Heterogens: 30W, GOL, NA, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4pjiB (B:)
miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
Sequence, based on observed residues (ATOM records): (download)
>4pjiB (B:)
miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrd
- Chain 'C':
No sequence available.
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4pjiD (D:)
miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
Sequence, based on observed residues (ATOM records): (download)
>4pjiD (D:)
miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrd
- Chain 'E':
Sequence, based on SEQRES records: (download)
>4pjiE (E:)
hmgqnidqptemtategaivqinctyqtsgfnglfwyqqhageaptflsynvldgleekg
rfssflsrskgysylllkelqmkdsasylcavvdsnyqliwgagtkliikpdiqnpdpav
yqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnks
dfacanafnnsiipedtffpspess
Sequence, based on observed residues (ATOM records): (download)
>4pjiE (E:)
qnidqptemtategaivqinctyqtsgfnglfwyqqhageaptflsynvldgleekgrfs
sflsrskgysylllkelqmkdsasylcavvdsnyqliwgagtkliikpdiqnpdpavyql
rdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnksdfa
canafnnsiipedtffps
- Chain 'F':
No sequence available.
- Chain 'G':
No sequence available.
- Chain 'H':
Sequence, based on SEQRES records: (download)
>4pjiH (H:)
hmnagvtqtpkfqvlktgqsmtlqcaqdmnhnsmywyrqdpgmglrliyysasegttdkg
evpngynvsrlnkrefslrlesaapsqtsvyfcassppggtdtqyfgegsrltvledlkn
vfppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplke
qpalndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaea
wgrad
Sequence, based on observed residues (ATOM records): (download)
>4pjiH (H:)
gvtqtpkfqvlktgqsmtlqcaqdmnhnsmywyrqdpgmglrliyysasegttdkgevpn
gynvsrlnkrefslrlesaapsqtsvyfcassppggtdtqyfgegsrltvledlknvfpp
evavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpal
ndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawg