PDB entry 4lfg

View 4lfg on RCSB PDB site
Description: Crystal structure of geranylgeranyl diphosphate synthase sub1274 (target efi-509455) from streptococcus uberis 0140j with bound magnesium and isopentyl diphosphate, fully liganded complex;
Class: transferase
Keywords: ISOPRENOID SYNTHASE, ENZYME FUNCTION INITIATIVE, EFI, TRANSF, TRANSFERASE, Structural Genomics
Deposited on 2013-06-26, released 2013-07-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-01-24, with a file datestamp of 2018-01-19.
Experiment type: XRAY
Resolution: 1.76 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Geranylgeranyl diphosphate synthase
    Species: Streptococcus uberis [TaxId:218495]
    Gene: fps, SUB1274
    Database cross-references and differences (RAF-indexed):
    • Uniprot B9DUT7 (1-289)
      • expression tag (0)
    Domains in SCOPe 2.08: d4lfga1, d4lfga2
  • Chain 'B':
    Compound: Geranylgeranyl diphosphate synthase
    Species: Streptococcus uberis [TaxId:218495]
    Gene: fps, SUB1274
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4lfgb_
  • Heterogens: IPE, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4lfgA (A:)
smdklkkidqtihafycekaviseklneavlysinaggkrirpilfleviealqipltes
hfkaaaalemihtgslihddlpamdnddyrrgqltnhkkfdeatailagdslfldafgml
aetdfptdvtvdlvrslssasgtfgmvggqmldmaaegkklnlknlqlihrhktgqllay
pfwaaarvaqldenllatfleigmiiglafqvrddilditanfeeigktpkkdvmaekmt
yphllglnesyqildesldqaeailrklsdeiafapqkilslierlrlda

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4lfgB (B:)
smdklkkidqtihafycekaviseklneavlysinaggkrirpilfleviealqipltes
hfkaaaalemihtgslihddlpamdnddyrrgqltnhkkfdeatailagdslfldafgml
aetdfptdvtvdlvrslssasgtfgmvggqmldmaaegkklnlknlqlihrhktgqllay
pfwaaarvaqldenllatfleigmiiglafqvrddilditanfeeigktpkkdvmaekmt
yphllglnesyqildesldqaeailrklsdeiafapqkilslierlrlda

    Sequence, based on observed residues (ATOM records): (download) 
    >4lfgB (B:)
dklkkidqtihafycekaviseklneavlysinaggkrirpilfleviealqiplteshf
kaaaalemihtgslihddlpamdnddyrrgqltnhkkfdeatailagdslfldafgmlae
tdfptdvtvdlvrslssasgtfgmvggqmldmaaegkklnlknlqlihrhktgqllaypf
waaarvaqldenllatfleigmiiglafqvrddilditanfeeigktpkkdvmaekmtyp
hllglnesyqildesldqaeailrklsdeiafapqkilslierlrlda