PDB entry 4iv1

View 4iv1 on RCSB PDB site
Description: Crystal structure of recombinant foot-and-mouth-disease virus A22 empty capsid
Class: virus
Keywords: icosahedral virus, capsids, picornavirus, apthovirus, virus, vaccine
Deposited on 2013-01-22, released 2013-04-17
The last revision prior to the SCOPe 2.06 freeze date was dated 2013-04-17, with a file datestamp of 2013-04-12.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.19
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Capsid protein VP1
    Species: Foot-and-mouth disease virus - type A [TaxId:12111]
    Gene: FMDV A22
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4iv1a_
  • Chain 'B':
    Compound: capsid protein VP2
    Species: Foot-and-mouth disease virus - type A [TaxId:12111]
    Gene: FMDV A22
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: capsid protein vp3
    Species: Foot-and-mouth disease virus - type A [TaxId:12111]
    Gene: FMDV A22
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4iv1c_
  • Chain 'D':
    Compound: capsid protein VP4
    Species: Foot-and-mouth disease virus - type A [TaxId:12111]
    Gene: FMDV A22
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4iv1A (A:)
ttttgesadpvtttvenyggetqvqrrqhtdvtfimdrfvkiqnlnpthvidlmqthqhg
lvgallraatyyfsdleivvrhdgnltwvpngapeaalsntgnptaylkapftrlalpyt
aphrvlatvyngtskysaggtgrrgdlgplaarvaaqlpasfnfgaiqattihellvrmk
raelycprpllavevssqdrhkqkiiapakq

    Sequence, based on observed residues (ATOM records): (download) 
    >4iv1A (A:)
ttttgesadpvtttvenyggetqvqrrqhtdvtfimdrfvkiqnlnpthvidlmqthqhg
lvgallraatyyfsdleivvrhdgnltwvpngapeaalsntgnptaylkapftrlalpyt
aphrvlatvyngtskyaqlpasfnfgaiqattihellvrmkraelycprpllavevssqd
rhkqkiiapak

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4iv1C (C:)
givpvacsdgygglvttdpktadpvygmvynpprtnypgrftnlldvaeacptflcfdeg
kpyvvtrtdeqrllakfdvslaakhmsntylsgiaqyyaqysgtinlhfmftgstdskar
ymvayvppgvetppdtpekaahcihaewdtglnskftfsipyvsaadyaytasdvaettn
vqgwvciyqithgkaeqdtlvvsvsagkdfelrlpidprsq

  • Chain 'D':
    No sequence available.