PDB entry 4ijc

View 4ijc on RCSB PDB site
Description: Crystal structure of arabinose dehydrogenase Ara1 from Saccharomyces cerevisiae
Class: oxidoreductase
Keywords: BETA BARREL, TIM barrel, OXIDOREDUCTASE
Deposited on 2012-12-21, released 2013-11-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2013-11-27, with a file datestamp of 2013-11-22.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.225
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: D-arabinose dehydrogenase [NAD(P)+] heavy chain
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: ARA1, YBR1127, YBR149W
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4ijca_
  • Chain 'B':
    Compound: D-arabinose dehydrogenase [NAD(P)+] heavy chain
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: ARA1, YBR1127, YBR149W
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4ijcb_
  • Heterogens: SO4, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4ijcA (A:)
msssvastenivenmlhpktteiyfslnngvripalglgtanpheklaetkqavkaaika
gyrhidtawayetepfvgeaikelledgsikredlfittkvwpvlwdevdrslneslkal
gleyvdlllqhwplcfekikdpkgisglvktpvddsgktmyaadgdyletykqlekiyld
pndhrvraigvsnfsieylerlikecrvkptvnqvethphlpqmelrkfcfmhdilltay
splgshgapnlkiplvkklaekynvtgndllisyhirqgtiviprslnpvrisssiefas
ltkdelqelndfgekypvrfidepfaailpeftgngpnldnlky

    Sequence, based on observed residues (ATOM records): (download) 
    >4ijcA (A:)
mlhpktteiyfslnngvripalglgtanpheklaetkqavkaaikagyrhidtawayete
pfvgeaikelledgsikredlfittkvwpvlwdevdrslneslkalgleyvdlllqhwpl
cfekikdpkgisglvktpvddsgktmyaadgdyletykqlekiyldpndhrvraigvsnf
sieylerlikecrvkptvnqvethphlpqmelrkfcfmhdilltaysplgshgapnlkip
lvkklaekynvtgndllisyhirqgtiviprslnpvrisssiefasltkdelqelndfge
kypvrfidepfaailpeftgngpnldnlky

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4ijcB (B:)
msssvastenivenmlhpktteiyfslnngvripalglgtanpheklaetkqavkaaika
gyrhidtawayetepfvgeaikelledgsikredlfittkvwpvlwdevdrslneslkal
gleyvdlllqhwplcfekikdpkgisglvktpvddsgktmyaadgdyletykqlekiyld
pndhrvraigvsnfsieylerlikecrvkptvnqvethphlpqmelrkfcfmhdilltay
splgshgapnlkiplvkklaekynvtgndllisyhirqgtiviprslnpvrisssiefas
ltkdelqelndfgekypvrfidepfaailpeftgngpnldnlky

    Sequence, based on observed residues (ATOM records): (download) 
    >4ijcB (B:)
mlhpktteiyfslnngvripalglgtanpheklaetkqavkaaikagyrhidtawayete
pfvgeaikelledgsikredlfittkvwpvlwdevdrslneslkalgleyvdlllqhwpl
cfekikdpkgisglvktpvddsgktmyaadgdyletykqlekiyldpndhrvraigvsnf
sieylerlikecrvkptvnqvethphlpqmelrkfcfmhdilltaysplgshgapnlkip
lvkklaekynvtgndllisyhirqgtiviprslnpvrisssiefasltkdelqelndfge
kypvrfidepfaailpeftgngpnldnlky