PDB entry 4gcs

View 4gcs on RCSB PDB site
Description: Crystal Structure of E. coli OmpF porin in complex with Ertapenem
Class: membrane protein/antibiotic
Keywords: Beta-barrel, Protein-drug complex, Trimer, Non-specific channel, Ertapenem binding, Outer membrane, MEMBRANE PROTEIN-ANTIBIOTIC complex
Deposited on 2012-07-30, released 2012-12-19
The last revision prior to the SCOPe 2.04 freeze date was dated 2013-02-06, with a file datestamp of 2013-02-01.
Experiment type: XRAY
Resolution: 1.87 Å
R-factor: 0.193
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Outer membrane protein F
    Species: Escherichia coli [TaxId:83333]
    Gene: ompF, cmlB, coa, cry, tolF, b0929, JW0912
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4gcsa_
  • Chain 'B':
    Compound: Outer membrane protein F
    Species: Escherichia coli [TaxId:83333]
    Gene: ompF, cmlB, coa, cry, tolF, b0929, JW0912
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4gcsb_
  • Heterogens: 1RG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4gcsA (A:)
gaeiynkdgnkvdlygkavglhyfskgngensyggngdmtyarlgfkgetqinsdltgyg
qweynfqgnnsegadaqtgnktrlafaglkyadvgsfdygrnygvvydalgytdmlpefg
gdtaysddffvgrvggvatyrnsnffglvdglnfavqylgknerdtarrsngdgvggsis
yeyegfgivgaygaadrtnlqeaqplgngkkaeqwatglkydanniylaanygetrnatp
itnkftntsgfanktqdvllvaqyqfdfglrpsiaytkskakdvegigdvdlvnyfevga
tyyfnknmstyvdyiinqidsdnklgvgsddtvavgivyqf

    Sequence, based on observed residues (ATOM records): (download) 
    >4gcsA (A:)
gnkvdlygkavglhyfskgngensyggngdmtyarlgfkgetqinsdltgygqweynfqg
nnsegadaqtgnktrlafaglkyadvgsfdygrnygvvydalgytdmlpefggdtaysdd
ffvgrvggvatyrnsnffglvdglnfavqylgknerdtarrsngdgvggsisyeyegfgi
vgaygaadrtnlqeaqplgngkkaeqwatglkydanniylaanygetrnatpitnkftnt
sgfanktqdvllvaqyqfdfglrpsiaytkskakdvegigdvdlvnyfevgatyyfnknm
styvdyiinqidsdnklgvgsddtvavgivyqf

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4gcsB (B:)
gaeiynkdgnkvdlygkavglhyfskgngensyggngdmtyarlgfkgetqinsdltgyg
qweynfqgnnsegadaqtgnktrlafaglkyadvgsfdygrnygvvydalgytdmlpefg
gdtaysddffvgrvggvatyrnsnffglvdglnfavqylgknerdtarrsngdgvggsis
yeyegfgivgaygaadrtnlqeaqplgngkkaeqwatglkydanniylaanygetrnatp
itnkftntsgfanktqdvllvaqyqfdfglrpsiaytkskakdvegigdvdlvnyfevga
tyyfnknmstyvdyiinqidsdnklgvgsddtvavgivyqf

    Sequence, based on observed residues (ATOM records): (download) 
    >4gcsB (B:)
gnkvdlygkavglhyfskgngensyggngdmtyarlgfkgetqinsdltgygqweynfqg
nnsegadaqtgnktrlafaglkyadvgsfdygrnygvvydalgytdmlpefggdtaysdd
ffvgrvggvatyrnsnffglvdglnfavqylgknerdtarrsngdgvggsisyeyegfgi
vgaygaadrtnlqeaqplgngkkaeqwatglkydanniylaanygetrnatpitnkftnt
sgfanktqdvllvaqyqfdfglrpsiaytkskakdvegigdvdlvnyfevgatyyfnknm
styvdyiinqidsdnklgvgsddtvavgivyqf