PDB entry 4fuq

View 4fuq on RCSB PDB site
Description: Crystal structure of apo MatB from Rhodopseudomonas palustris
Class: ligase
Keywords: ANL superfamily, methylmalonyl-CoA synthetase, CoA, methylmalonate, malonate, LIGASE
Deposited on 2012-06-28, released 2012-07-25
The last revision prior to the SCOPe 2.06 freeze date was dated 2012-09-12, with a file datestamp of 2012-09-07.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.16
AEROSPACI score: 0.58 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Malonyl CoA synthetase
    Species: Rhodopseudomonas palustris [TaxId:258594]
    Gene: matB, RPA0221
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4fuqa_
  • Chain 'B':
    Compound: Malonyl CoA synthetase
    Species: Rhodopseudomonas palustris [TaxId:258594]
    Gene: matB, RPA0221
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4fuqb_
  • Chain 'C':
    Compound: Malonyl CoA synthetase
    Species: Rhodopseudomonas palustris [TaxId:258594]
    Gene: matB, RPA0221
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4fuqc_
  • Chain 'D':
    Compound: Malonyl CoA synthetase
    Species: Rhodopseudomonas palustris [TaxId:258594]
    Gene: matB, RPA0221
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4fuqd_
  • Heterogens: SO4, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4fuqA (A:)
mnanlfarlfdklddphklaietaagdkisyaelvaragrvanvlvarglqvgdrvaaqt
eksvealvlylatvraggvylplntaytlheldyfitdaepkivvcdpskrdgiaaiaak
vgatvetlgpdgrgsltdaaagaseafatidrgaddlaailytsgttgrskgamlshdnl
asnsltlvdywrftpddvlihalpiyhthglfvasnvtlfargsmiflpkfdpdkildlm
aratvlmgvptfytrllqsprltkettghmrlfisgsaplladthrewsaktghavlery
gmtetnmntsnpydgdrvpgavgpalpgvsarvtdpetgkelprgdigmievkgpnvfkg
ywrmpektksefrddgffitgdlgkidergyvhilgrgkdlvitggfnvypkeieseida
mpgvvesavigvphadfgegvtavvvrdkgatideaqvlhgldgqlakfkmpkkvifvdd
lprntmgkvqknvlretykdiyk

    Sequence, based on observed residues (ATOM records): (download) 
    >4fuqA (A:)
mnanlfarlfdklddphklaietaagdkisyaelvaragrvanvlvarglqvgdrvaaqt
eksvealvlylatvraggvylplntaytlheldyfitdaepkivvcdpskrdgiaaiaak
vgatvetlgpdgrgsltdaaagaseafatidrgaddlaailytstgrskgamlshdnlas
nsltlvdywrftpddvlihalpiyhthglfvasnvtlfargsmiflpkfdpdkildlmar
atvlmgvptfytrllqsprltkettghmrlfisgsaplladthrewsaktghavlerygm
tetnmntsnpydgdrvpgavgpalpgvsarvtdpetgkelprgdigmievkgpnvfkgyw
rmpektksefrddgffitgdlgkidergyvhilgrgkdlvitggfnvypkeieseidamp
gvvesavigvphadfgegvtavvvrdkgatideaqvlhgldgqlakfkmpkkvifvddlp
rntmgkvqknvlretykdiyk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4fuqB (B:)
mnanlfarlfdklddphklaietaagdkisyaelvaragrvanvlvarglqvgdrvaaqt
eksvealvlylatvraggvylplntaytlheldyfitdaepkivvcdpskrdgiaaiaak
vgatvetlgpdgrgsltdaaagaseafatidrgaddlaailytsgttgrskgamlshdnl
asnsltlvdywrftpddvlihalpiyhthglfvasnvtlfargsmiflpkfdpdkildlm
aratvlmgvptfytrllqsprltkettghmrlfisgsaplladthrewsaktghavlery
gmtetnmntsnpydgdrvpgavgpalpgvsarvtdpetgkelprgdigmievkgpnvfkg
ywrmpektksefrddgffitgdlgkidergyvhilgrgkdlvitggfnvypkeieseida
mpgvvesavigvphadfgegvtavvvrdkgatideaqvlhgldgqlakfkmpkkvifvdd
lprntmgkvqknvlretykdiyk

    Sequence, based on observed residues (ATOM records): (download) 
    >4fuqB (B:)
mnanlfarlfdklddphklaietaagdkisyaelvaragrvanvlvarglqvgdrvaaqt
eksvealvlylatvraggvylplntaytlheldyfitdaepkivvcdpskrdgiaaiaak
vgatvetlgpdgrgsltdaaagaseafatidrgaddlaailytstgrskgamlshdnlas
nsltlvdywrftpddvlihalpiyhthglfvasnvtlfargsmiflpkfdpdkildlmar
atvlmgvptfytrllqsprltkettghmrlfisgsaplladthrewsaktghavlerygm
tetnmntsnpydgdrvpgavgpalpgvsarvtdpetgkelprgdigmievkgpnvfkgyw
rmpektksefrddgffitgdlgkidergyvhilgrgkdlvitggfnvypkeieseidamp
gvvesavigvphadfgegvtavvvrdkgatideaqvlhgldgqlakfkmpkkvifvddlp
rntmgkvqknvlretykdiyk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4fuqC (C:)
mnanlfarlfdklddphklaietaagdkisyaelvaragrvanvlvarglqvgdrvaaqt
eksvealvlylatvraggvylplntaytlheldyfitdaepkivvcdpskrdgiaaiaak
vgatvetlgpdgrgsltdaaagaseafatidrgaddlaailytsgttgrskgamlshdnl
asnsltlvdywrftpddvlihalpiyhthglfvasnvtlfargsmiflpkfdpdkildlm
aratvlmgvptfytrllqsprltkettghmrlfisgsaplladthrewsaktghavlery
gmtetnmntsnpydgdrvpgavgpalpgvsarvtdpetgkelprgdigmievkgpnvfkg
ywrmpektksefrddgffitgdlgkidergyvhilgrgkdlvitggfnvypkeieseida
mpgvvesavigvphadfgegvtavvvrdkgatideaqvlhgldgqlakfkmpkkvifvdd
lprntmgkvqknvlretykdiyk

    Sequence, based on observed residues (ATOM records): (download) 
    >4fuqC (C:)
mnanlfarlfdklddphklaietaagdkisyaelvaragrvanvlvarglqvgdrvaaqt
eksvealvlylatvraggvylplntaytlheldyfitdaepkivvcdpskrdgiaaiaak
vgatvetlgpdgrgsltdaaagaseafatidrgaddlaailytsgtgrskgamlshdnla
snsltlvdywrftpddvlihalpiyhthglfvasnvtlfargsmiflpkfdpdkildlma
ratvlmgvptfytrllqsprltkettghmrlfisgsaplladthrewsaktghavleryg
mtetnmntsnpydgdrvpgavgpalpgvsarvtdpetgkelprgdigmievkgpnvfkgy
wrmpektksefrddgffitgdlgkidergyvhilgrgkdlvitggfnvypkeieseidam
pgvvesavigvphadfgegvtavvvrdkgatideaqvlhgldgqlakfkmpkkvifvddl
prntmgkvqknvlretykdiyk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4fuqD (D:)
mnanlfarlfdklddphklaietaagdkisyaelvaragrvanvlvarglqvgdrvaaqt
eksvealvlylatvraggvylplntaytlheldyfitdaepkivvcdpskrdgiaaiaak
vgatvetlgpdgrgsltdaaagaseafatidrgaddlaailytsgttgrskgamlshdnl
asnsltlvdywrftpddvlihalpiyhthglfvasnvtlfargsmiflpkfdpdkildlm
aratvlmgvptfytrllqsprltkettghmrlfisgsaplladthrewsaktghavlery
gmtetnmntsnpydgdrvpgavgpalpgvsarvtdpetgkelprgdigmievkgpnvfkg
ywrmpektksefrddgffitgdlgkidergyvhilgrgkdlvitggfnvypkeieseida
mpgvvesavigvphadfgegvtavvvrdkgatideaqvlhgldgqlakfkmpkkvifvdd
lprntmgkvqknvlretykdiyk

    Sequence, based on observed residues (ATOM records): (download) 
    >4fuqD (D:)
mnanlfarlfdklddphklaietaagdkisyaelvaragrvanvlvarglqvgdrvaaqt
eksvealvlylatvraggvylplntaytlheldyfitdaepkivvcdpskrdgiaaiaak
vgatvetlgpdgrgsltdaaagaseafatidrgaddlaailytsttgrskgamlshdnla
snsltlvdywrftpddvlihalpiyhthglfvasnvtlfargsmiflpkfdpdkildlma
ratvlmgvptfytrllqsprltkettghmrlfisgsaplladthrewsaktghavleryg
mtetnmntsnpydgdrvpgavgpalpgvsarvtdptgkelprgdigmievkgpnvfkgyw
rmpektksefrddgffitgdlgkidergyvhilgrgkdlvitggfnvypkeieseidamp
gvvesavigvphadfgegvtavvvrdkgatideaqvlhgldgqlakfkmpkkvifvddlp
rntmgkvqknvlretykdiyk