PDB entry 4fu4

View 4fu4 on RCSB PDB site
Description: Human collagenase 3 (MMP-13) with peptide from pro-domain
Class: hydrolase
Keywords: protein-peptide complex, collagenase, collagen, cleavage with MMP3, hydrolase, pro-peptide, metzincin, Zinc metalloprotease, collagen cleavage
Deposited on 2012-06-28, released 2013-08-21
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-02-05, with a file datestamp of 2014-01-31.
Experiment type: XRAY
Resolution: 2.85 Å
R-factor: 0.182
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: collagenase 3
    Species: Homo sapiens [TaxId:9606]
    Gene: MMP13
    Database cross-references and differences (RAF-indexed):
    • Uniprot P45452 (0-367)
      • engineered mutation (119)
    Domains in SCOPe 2.08: d4fu4a1, d4fu4a2
  • Chain 'B':
    Compound: collagenase 3
    Species: Homo sapiens [TaxId:9606]
    Gene: MMP13
    Database cross-references and differences (RAF-indexed):
    • Uniprot P45452 (0-367)
      • engineered mutation (119)
    Domains in SCOPe 2.08: d4fu4b1, d4fu4b2
  • Chain 'C':
    Compound: Collagenase 3, pro-domain peptide
    Species: Homo sapiens [TaxId:9606]
    Gene: MMP13
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Collagenase 3, pro-domain peptide
    Species: Homo sapiens [TaxId:9606]
    Gene: MMP13
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN, CA, CL, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4fu4A (A:)
ynvfprtlkwskmnltyrivnytpdmthsevekafkkafkvwsdvtplnftrlhdgiadi
misfgikehgdfypfdgpsgllahafppgpnyggdahfdddetwtssskgynlflvaaha
fghslgldhskdpgalmfpiytytgkshfmlpdddvqgiqslygpgdedpnpkhpktpdk
cdpslsldaitslrgetmifkdrffwrlhpqqvdaelfltksfwpelpnridaayehpsh
dlififrgrkfwalngydilegypkkiselglpkevkkisaavhfedtgktllfsgnqvw
ryddtnhimdkdyprlieedfpgigdkvdavyekngyiyffngpiqfeysiwsnrivrvm
pansilwc

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4fu4B (B:)
ynvfprtlkwskmnltyrivnytpdmthsevekafkkafkvwsdvtplnftrlhdgiadi
misfgikehgdfypfdgpsgllahafppgpnyggdahfdddetwtssskgynlflvaaha
fghslgldhskdpgalmfpiytytgkshfmlpdddvqgiqslygpgdedpnpkhpktpdk
cdpslsldaitslrgetmifkdrffwrlhpqqvdaelfltksfwpelpnridaayehpsh
dlififrgrkfwalngydilegypkkiselglpkevkkisaavhfedtgktllfsgnqvw
ryddtnhimdkdyprlieedfpgigdkvdavyekngyiyffngpiqfeysiwsnrivrvm
pansilwc

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.