PDB entry 4emm

View 4emm on RCSB PDB site
Description: Crystal structure of Staphylococcus aureus ClpP in compact conformation
Class: hydrolase
Keywords: tetradecameric chamber, Hydrolase, protein binding
Deposited on 2012-04-12, released 2013-04-17
The last revision prior to the SCOPe 2.06 freeze date was dated 2014-01-01, with a file datestamp of 2013-12-27.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.242
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Staphylococcus aureus [TaxId:196620]
    Gene: CLPP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4emma_
  • Chain 'B':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Staphylococcus aureus [TaxId:196620]
    Gene: CLPP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4emmb_
  • Chain 'C':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Staphylococcus aureus [TaxId:196620]
    Gene: CLPP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4emmc_
  • Chain 'D':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Staphylococcus aureus [TaxId:196620]
    Gene: CLPP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4emmd_
  • Chain 'E':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Staphylococcus aureus [TaxId:196620]
    Gene: CLPP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4emme_
  • Chain 'F':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Staphylococcus aureus [TaxId:196620]
    Gene: CLPP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4emmf_
  • Chain 'G':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Staphylococcus aureus [TaxId:196620]
    Gene: CLPP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4emmg_
  • Chain 'H':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Staphylococcus aureus [TaxId:196620]
    Gene: CLPP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4emmh_
  • Chain 'I':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Staphylococcus aureus [TaxId:196620]
    Gene: CLPP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4emmi_
  • Chain 'J':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Staphylococcus aureus [TaxId:196620]
    Gene: CLPP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4emmj_
  • Chain 'K':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Staphylococcus aureus [TaxId:196620]
    Gene: CLPP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4emmk_
  • Chain 'L':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Staphylococcus aureus [TaxId:196620]
    Gene: CLPP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4emml_
  • Chain 'M':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Staphylococcus aureus [TaxId:196620]
    Gene: CLPP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4emmm_
  • Chain 'V':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Staphylococcus aureus [TaxId:196620]
    Gene: CLPP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4emmv_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4emmA (A:)
mnliptviettnrgeraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdi
ylyinspggsvtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaev
mihqplggaqgqateieiaanhilktreklnrilsertgqsiekiqkdtdrdnfltaeea
keyglidevmvpetklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4emmA (A:)
iptvieraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdiylyinspgg
svtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaevmihqpleia
anhilktreklnrilsertgqsiekiqkdtdrdnfltaeeakeyglidevmvp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4emmB (B:)
mnliptviettnrgeraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdi
ylyinspggsvtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaev
mihqplggaqgqateieiaanhilktreklnrilsertgqsiekiqkdtdrdnfltaeea
keyglidevmvpetklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4emmB (B:)
iptvieraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdiylyinspgg
svtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaevmihqplaan
hilktreklnrilsertgqsiekiqkdtdrdnfltaeeakeyglidevmvp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4emmC (C:)
mnliptviettnrgeraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdi
ylyinspggsvtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaev
mihqplggaqgqateieiaanhilktreklnrilsertgqsiekiqkdtdrdnfltaeea
keyglidevmvpetklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4emmC (C:)
iptvieraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdiylyinspgg
svtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaevmihqpliaa
nhilktreklnrilsertgqsiekiqkdtdrdnfltaeeakeyglidevmvp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4emmD (D:)
mnliptviettnrgeraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdi
ylyinspggsvtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaev
mihqplggaqgqateieiaanhilktreklnrilsertgqsiekiqkdtdrdnfltaeea
keyglidevmvpetklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4emmD (D:)
iptviraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdiylyinspggs
vtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaevmihqpliaan
hilktreklnrilsertgqsiekiqkdtdrdnfltaeeakeyglidevmvp

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4emmE (E:)
mnliptviettnrgeraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdi
ylyinspggsvtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaev
mihqplggaqgqateieiaanhilktreklnrilsertgqsiekiqkdtdrdnfltaeea
keyglidevmvpetklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4emmE (E:)
iptvietraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdiylyinspg
gsvtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaevmihqplia
anhilktreklnrilsertgqsiekiqkdtdrdnfltaeeakeyglidevmvp

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4emmF (F:)
mnliptviettnrgeraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdi
ylyinspggsvtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaev
mihqplggaqgqateieiaanhilktreklnrilsertgqsiekiqkdtdrdnfltaeea
keyglidevmvpetklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4emmF (F:)
iptviraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdiylyinspggs
vtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaevmihqplggia
anhilktreklnrilsertgqsiekiqkdtdrdnfltaeeakeyglidevmvp

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >4emmG (G:)
mnliptviettnrgeraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdi
ylyinspggsvtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaev
mihqplggaqgqateieiaanhilktreklnrilsertgqsiekiqkdtdrdnfltaeea
keyglidevmvpetklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4emmG (G:)
iptvieeraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdiylyinspg
gsvtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaevmihqplia
anhilktreklnrilsertgqsiekiqkdtdrdnfltaeeakeyglidevmvp

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >4emmH (H:)
mnliptviettnrgeraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdi
ylyinspggsvtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaev
mihqplggaqgqateieiaanhilktreklnrilsertgqsiekiqkdtdrdnfltaeea
keyglidevmvpetklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4emmH (H:)
liptvietraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdiylyinsp
ggsvtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaevmihqple
iaanhilktreklnrilsertgqsiekiqkdtdrdnfltaeeakeyglidevmvp

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >4emmI (I:)
mnliptviettnrgeraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdi
ylyinspggsvtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaev
mihqplggaqgqateieiaanhilktreklnrilsertgqsiekiqkdtdrdnfltaeea
keyglidevmvpetklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4emmI (I:)
iptvieraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdiylyinspgg
svtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaevmihqpliaa
nhilktreklnrilsertgqsiekiqkdtdrdnfltaeeakeyglidevmvp

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >4emmJ (J:)
mnliptviettnrgeraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdi
ylyinspggsvtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaev
mihqplggaqgqateieiaanhilktreklnrilsertgqsiekiqkdtdrdnfltaeea
keyglidevmvpetklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4emmJ (J:)
iptvieeraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdiylyinspg
gsvtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaevmihqplia
anhilktreklnrilsertgqsiekiqkdtdrdnfltaeeakeyglidevmvp

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >4emmK (K:)
mnliptviettnrgeraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdi
ylyinspggsvtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaev
mihqplggaqgqateieiaanhilktreklnrilsertgqsiekiqkdtdrdnfltaeea
keyglidevmvpetklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4emmK (K:)
iptvieeraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdiylyinspg
gsvtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaevmihqplia
anhilktreklnrilsertgqsiekiqkdtdrdnfltaeeakeyglidevmvp

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >4emmL (L:)
mnliptviettnrgeraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdi
ylyinspggsvtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaev
mihqplggaqgqateieiaanhilktreklnrilsertgqsiekiqkdtdrdnfltaeea
keyglidevmvpetklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4emmL (L:)
iptaydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdiylyinspggsvta
gfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaevmihqpliaanhil
ktreklnrilsertgqsiekiqkdtdrdnfltaeeakeyglidevmvp

  • Chain 'M':
    Sequence, based on SEQRES records: (download) 
    >4emmM (M:)
mnliptviettnrgeraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdi
ylyinspggsvtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaev
mihqplggaqgqateieiaanhilktreklnrilsertgqsiekiqkdtdrdnfltaeea
keyglidevmvpetklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4emmM (M:)
iptvietaydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdiylyinspgg
svtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaevmihqpliaa
nhilktreklnrilsertgqsiekiqkdtdrdnfltaeeakeyglidevmvp

  • Chain 'V':
    Sequence, based on SEQRES records: (download) 
    >4emmV (V:)
mnliptviettnrgeraydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdi
ylyinspggsvtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaev
mihqplggaqgqateieiaanhilktreklnrilsertgqsiekiqkdtdrdnfltaeea
keyglidevmvpetklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4emmV (V:)
iptvieaydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdiylyinspggs
vtagfaiydtiqhikpdvqticigmaasmgsfllaagakgkrfalpnaevmihqpliaan
hilktreklnrilsertgqsiekiqkdtdrdnfltaeeakeyglidevmvpe