PDB entry 3zyf

View 3zyf on RCSB PDB site
Description: crystal structure of pa-il lectin complexed with npg at 1.9 a resolution
Class: sugar binding protein
Keywords: adhesin, glycosphingolipid-antigen, galactose-specific, galactosides, sugar binding protein
Deposited on 2011-08-22, released 2011-09-21
The last revision prior to the SCOPe 2.06 freeze date was dated 2012-04-25, with a file datestamp of 2012-04-20.
Experiment type: XRAY
Resolution: 1.94 Å
R-factor: 0.1867
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: PA-I galactophilic lectin
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3zyfa_
  • Chain 'B':
    Compound: PA-I galactophilic lectin
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3zyfb_
  • Chain 'C':
    Compound: PA-I galactophilic lectin
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3zyfc_
  • Chain 'D':
    Compound: PA-I galactophilic lectin
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3zyfd_
  • Heterogens: CA, 147, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3zyfA (A:)
mawkgevlanneagqvtsiiynpgdvitivaagwasygptqkwgpqgdrehpdqglichd
afcgalvmkignsgtipvntglfrwvapnnvqgaitliyndvpgtygnnsgsfsvnigkd
qs

    Sequence, based on observed residues (ATOM records): (download) 
    >3zyfA (A:)
awkgevlanneagqvtsiiynpgdvitivaagwasygptqkwgpqgdrehpdqglichda
fcgalvmkignsgtipvntglfrwvapnnvqgaitliyndvpgtygnnsgsfsvnigkdq
s

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3zyfB (B:)
mawkgevlanneagqvtsiiynpgdvitivaagwasygptqkwgpqgdrehpdqglichd
afcgalvmkignsgtipvntglfrwvapnnvqgaitliyndvpgtygnnsgsfsvnigkd
qs

    Sequence, based on observed residues (ATOM records): (download) 
    >3zyfB (B:)
awkgevlanneagqvtsiiynpgdvitivaagwasygptqkwgpqgdrehpdqglichda
fcgalvmkignsgtipvntglfrwvapnnvqgaitliyndvpgtygnnsgsfsvnigkdq
s

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3zyfC (C:)
mawkgevlanneagqvtsiiynpgdvitivaagwasygptqkwgpqgdrehpdqglichd
afcgalvmkignsgtipvntglfrwvapnnvqgaitliyndvpgtygnnsgsfsvnigkd
qs

    Sequence, based on observed residues (ATOM records): (download) 
    >3zyfC (C:)
awkgevlanneagqvtsiiynpgdvitivaagwasygptqkwgpqgdrehpdqglichda
fcgalvmkignsgtipvntglfrwvapnnvqgaitliyndvpgtygnnsgsfsvnigkdq
s

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3zyfD (D:)
mawkgevlanneagqvtsiiynpgdvitivaagwasygptqkwgpqgdrehpdqglichd
afcgalvmkignsgtipvntglfrwvapnnvqgaitliyndvpgtygnnsgsfsvnigkd
qs

    Sequence, based on observed residues (ATOM records): (download) 
    >3zyfD (D:)
awkgevlanneagqvtsiiynpgdvitivaagwasygptqkwgpqgdrehpdqglichda
fcgalvmkignsgtipvntglfrwvapnnvqgaitliyndvpgtygnnsgsfsvnigkdq
s