PDB entry 3vq4
View 3vq4 on RCSB PDB site
Description: Fragments bound to HIV-1 integrase
Class: transferase/transferase inhibitor
Keywords: RNaseH, DNA binding, DNA cleavage, DNA integration, TRANSFERASE-TRANSFERASE INHIBITOR complex
Deposited on
2012-03-20, released
2013-01-30
The last revision prior to the SCOPe 2.06 freeze date was dated
2013-01-30, with a file datestamp of
2013-01-25.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.211
AEROSPACI score: 0.44
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Pol polyprotein
Species: Human immunodeficiency virus 1 [TaxId:11676]
Gene: pol
Database cross-references and differences (RAF-indexed):
- Uniprot Q72498
- engineered mutation (1)
- engineered mutation (76)
- engineered mutation (84)
- engineered mutation (130)
Domains in SCOPe 2.06: d3vq4a_ - Chain 'B':
Compound: Pol polyprotein
Species: Human immunodeficiency virus 1 [TaxId:11676]
Gene: pol
Database cross-references and differences (RAF-indexed):
- Uniprot Q72498
- engineered mutation (76)
- engineered mutation (84)
- engineered mutation (130)
Domains in SCOPe 2.06: d3vq4b_ - Heterogens: CD, SO4, 0NX, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3vq4A (A:)
dsspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvh
tdngsnftsttvkaacdwagikqedgipynpqsqgviesmnkelkkiigqvrdqaehlkt
avqmavfihnhkrkggiggysagerivdiiatdiqtke
Sequence, based on observed residues (ATOM records): (download)
>3vq4A (A:)
sspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvht
dngsnftsttvkaacdwagikqedgipiesmnkelkkiigqvrdqaehlktavqmavfih
nhkrkggiggysagerivdiiatd
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3vq4B (B:)
dsspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvh
tdngsnftsttvkaacdwagikqedgipynpqsqgviesmnkelkkiigqvrdqaehlkt
avqmavfihnhkrkggiggysagerivdiiatdiqtke
Sequence, based on observed residues (ATOM records): (download)
>3vq4B (B:)
spgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtd
ngsnftsttvkaacdwagikqedesmnkelkkiigqvrdqaehlktavqmavfihnhkrk
ggiggysagerivdiiatdi