PDB entry 3vk1

View 3vk1 on RCSB PDB site
Description: Green-fluorescent variant of the non-fluorescent chromoprotein Rtms5
Class: fluorescent protein
Keywords: GFP, Anthozoa, Beta Can, Beta Barrel, Fluorescent Protein, Pigment Protein, Pigment, Pocilloporin, Chromoprotein, Luminescent Protein, Fluorophore, Chromophore, Acylimine
Deposited on 2011-11-07, released 2012-06-06
The last revision prior to the SCOPe 2.04 freeze date was dated 2012-10-31, with a file datestamp of 2012-10-26.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.207
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: GFP-like non-fluorescent chromoprotein
    Species: Montipora efflorescens [TaxId:105610]
    Gene: Rtms5
    Database cross-references and differences (RAF-indexed):
    • Uniprot P83690 (Start-237)
      • chromophore (80)
      • engineered mutation (158)
    Domains in SCOPe 2.04: d3vk1a_
  • Heterogens: IOD, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3vk1A (A:)
mrgshhhhhhtdpssrsktmsviatqmtykvymsgtvnghyfevegdgkgrpyegeqtvk
ltvtkggplpfawdilspqcxsipftkypedipdyvkqsfpegftwerimnfedgavctv
sndssiqgncftyhvkfsglnfppngpvmqkktqgwepsserlfarggmlignnfmalkl
eggghylcefkttykakkpvkmpgyhyvdrkldvtnhnkdytsveqceisiarkpvva

    Sequence, based on observed residues (ATOM records): (download) 
    >3vk1A (A:)
viatqmtykvymsgtvnghyfevegdgkgrpyegeqtvkltvtkggplpfawdilspqcx
sipftkypedipdyvkqsfpegftwerimnfedgavctvsndssiqgncftyhvkfsgln
fppngpvmqkktqgwepsserlfarggmlignnfmalkleggghylcefkttykakkpvk
mpgyhyvdrkldvtnhnkdytsveqceisiarkpvva