PDB entry 3uk7

View 3uk7 on RCSB PDB site
Description: Crystal Structure of Arabidopsis thaliana DJ-1D
Class: transferase
Keywords: Rossmann Fold, cytosol, TRANSFERASE
Deposited on 2011-11-09, released 2011-11-23
The last revision prior to the SCOPe 2.07 freeze date was dated 2014-11-12, with a file datestamp of 2014-11-07.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: 0.177
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Class I glutamine amidotransferase-like domain-containing protein
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: DJ-1D
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3uk7a1, d3uk7a2
  • Chain 'B':
    Compound: Class I glutamine amidotransferase-like domain-containing protein
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: DJ-1D
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3uk7b1, d3uk7b2
  • Chain 'C':
    Compound: Class I glutamine amidotransferase-like domain-containing protein
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: DJ-1D
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9M8R4 (8-395)
      • expression tag (0-7)
    Domains in SCOPe 2.07: d3uk7c1, d3uk7c2, d3uk7c3
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3uk7A (A:)
gqqmgrgsmansrtvlilcgdymedyevmvpfqalqafgitvhtvcpgkkagdscptavh
dfcghqtyfesrghnftlnatfdevdlskydglvipggrapeylaltasvvelvkefsrs
gkpiasichgqlilaaadtvngrkctayatvgpslvaagakwvepitpdvcvvdgslita
atyeghpefiqlfvkalggkitgankrilflcgdymedyevkvpfqslqalgcqvdavcp
ekkagdrcptaihdfegdqtysekpghtfalttnfddlvsssydalvipggrapeylaln
ehvlnivkefmnsekpvasichgqqilaaagvlkgrkctaypavklnvvlgggtwlepdp
idrcftdgnlvtgaawpghpefvsqlmallgiqvsf

    Sequence, based on observed residues (ATOM records): (download) 
    >3uk7A (A:)
nsrtvlilcgdymedyevmvpfqalqafgitvhtvcpgkkagdscptavhdfcghqtyfe
srghnftlnatfdevdlskydglvipggrapeylaltasvvelvkefsrsgkpiasichg
qlilaaadtvngrkctayatvgpslvaagakwvepitpdvcvvdgslitaatyeghpefi
qlfvkalggkitgankrilflcgdymedyevkvpfqslqalgcqvdavcpekkagdrcpt
aihdfegdqtysekpghtfalttnfddlvsssydalvipggrapeylalnehvlnivkef
mnsekpvasichgqqilaaagvlkgrkctaypavklnvvlgggtwlepdpidrcftdgnl
vtgaawpghpefvsqlmallgiqvsf

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3uk7B (B:)
gqqmgrgsmansrtvlilcgdymedyevmvpfqalqafgitvhtvcpgkkagdscptavh
dfcghqtyfesrghnftlnatfdevdlskydglvipggrapeylaltasvvelvkefsrs
gkpiasichgqlilaaadtvngrkctayatvgpslvaagakwvepitpdvcvvdgslita
atyeghpefiqlfvkalggkitgankrilflcgdymedyevkvpfqslqalgcqvdavcp
ekkagdrcptaihdfegdqtysekpghtfalttnfddlvsssydalvipggrapeylaln
ehvlnivkefmnsekpvasichgqqilaaagvlkgrkctaypavklnvvlgggtwlepdp
idrcftdgnlvtgaawpghpefvsqlmallgiqvsf

    Sequence, based on observed residues (ATOM records): (download) 
    >3uk7B (B:)
nsrtvlilcgdymedyevmvpfqalqafgitvhtvcpgkkagdscptavhdfcghqtyfe
srghnftlnatfdevdlskydglvipggrapeylaltasvvelvkefsrsgkpiasichg
qlilaaadtvngrkctayatvgpslvaagakwvepitpdvcvvdgslitaatyeghpefi
qlfvkalggkitgankrilflcgdymedyevkvpfqslqalgcqvdavcpekkagdrcpt
aihdfegdqtysekpghtfalttnfddlvsssydalvipggrapeylalnehvlnivkef
mnsekpvasichgqqilaaagvlkgrkctaypavklnvvlgggtwlepdpidrcftdgnl
vtgaawpghpefvsqlmallgiqvsf

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3uk7C (C:)
gqqmgrgsmansrtvlilcgdymedyevmvpfqalqafgitvhtvcpgkkagdscptavh
dfcghqtyfesrghnftlnatfdevdlskydglvipggrapeylaltasvvelvkefsrs
gkpiasichgqlilaaadtvngrkctayatvgpslvaagakwvepitpdvcvvdgslita
atyeghpefiqlfvkalggkitgankrilflcgdymedyevkvpfqslqalgcqvdavcp
ekkagdrcptaihdfegdqtysekpghtfalttnfddlvsssydalvipggrapeylaln
ehvlnivkefmnsekpvasichgqqilaaagvlkgrkctaypavklnvvlgggtwlepdp
idrcftdgnlvtgaawpghpefvsqlmallgiqvsf