PDB entry 3ud6

View 3ud6 on RCSB PDB site
Description: Structural analyses of covalent enzyme-substrate analogue complexes reveal strengths and limitations of de novo enzyme design
Class: lyase/lyase inhibitor
Keywords: Computationally Designed, Retroaldolase, Tim Barrel, LYASE-LYASE INHIBITOR complex
Deposited on 2011-10-27, released 2011-11-23
The last revision prior to the SCOPe 2.02 freeze date was dated 2012-02-01, with a file datestamp of 2012-01-27.
Experiment type: XRAY
Resolution: 2.09 Å
R-factor: 0.227
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Retro-Aldolase
    Species: artificial gene [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 3UD6
    Domains in SCOPe 2.02: d3ud6a_
  • Heterogens: LL8, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3ud6A (A:)
    mprylkgwledvvqlslrrpsvrasrqrpiislnerilefnkrnitaiiatymrkspwgl
    dverdpieyakfmeryavglsicteekyangsyetlrkiassvsipilmadfivkesqid
    daynlgadtvplivkiltereleslleyarsygmepiikindendldialrigarfigic
    srdwetleinkenqrklismipsnvvkvastgiserneieelrklgvnafsiisslmrnp
    ekikeliegslehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >3ud6A (A:)
    prylkgwledvvqlslrrpsvrasrqrpiislnerilefnkrnitaiiatymrkspwgld
    verdpieyakfmeryavglsicteekyangsyetlrkiassvsipilmadfivkesqidd
    aynlgadtvplivkiltereleslleyarsygmepiikindendldialrigarfigics
    rdwetleinkenqrklismipsnvvkvastgiserneieelrklgvnafsiisslmrnpe
    kikelieg