PDB entry 3rr7

View 3rr7 on RCSB PDB site
Description: Binary Structure of the large fragment of Taq DNA polymerase bound to an abasic site
Class: transferase/DNA
Keywords: DNA polymerase, Abasic site, Translesion synthesis, TRANSFERASE-DNA complex
Deposited on 2011-04-29, released 2012-02-15
The last revision prior to the SCOPe 2.04 freeze date was dated 2012-05-09, with a file datestamp of 2012-05-04.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.195
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase I, thermostable
    Species: Thermus aquaticus [TaxId:271]
    Gene: pol I, pol1, polA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d3rr7a1, d3rr7a2
  • Chain 'B':
    Compound: (5'-d(*gp*ap*cp*cp*ap*cp*gp*gp*cp*gp*cp*(doc))-3')
  • Chain 'C':
    Compound: (5'-d(*ap*ap*ap*(3dr)p*gp*gp*cp*gp*cp*cp*gp*tp*gp*gp*tp*c)-3')
  • Heterogens: FMT, GOL, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3rr7A (A:)
aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargll
akdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserl
fanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarlea
evfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpiveki
lqyreltklkstyidplpdlihprtgrlhtrfnqtatatgrlsssdpnlqnipvrtplgq
rirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpre
avdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektle
egrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprl
eemgarmllqvhdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake

    Sequence, based on observed residues (ATOM records): (download) 
    >3rr7A (A:)
eeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllak
dlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfa
nlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaev
frlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilq
yreltklkstyidplpdlihprtgrlhtrfnqtatatgrlsssdpnlqnipvrtplgqri
rrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihteraaktinfgvlyg
msahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpd
learvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllqvhdelvleap
keraeavarlakevmegvyplavplevevgigedwlsake

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.