PDB entry 3rpt
View 3rpt on RCSB PDB site
Description: Crystal structure of the anti-HIV b12 scaffold protein
Class: hydrolase
Keywords: scaffold protein anti-HIV, HYDROLASE
Deposited on
2011-04-27, released
2011-12-21
The last revision prior to the SCOPe 2.06 freeze date was dated
2011-12-21, with a file datestamp of
2011-12-16.
Experiment type: XRAY
Resolution: 1.3 Å
R-factor: 0.175
AEROSPACI score: 0.66
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: endoglucanase e-2
Species: THERMOBIFIDA FUSCA [TaxId:2021]
Gene: CELB
Database cross-references and differences (RAF-indexed):
- Uniprot P26222 (0-70)
- see remark 999 (40-42)
- see remark 999 (71-72)
- see remark 999 (82-87)
- Uniprot P26222 (88-105)
- see remark 999 (106-108)
- see remark 999 (120-124)
- Uniprot P26222 (125-273)
- see remark 999 (157-158)
- see remark 999 (161)
- see remark 999 (218)
- expression tag (274-275)
Domains in SCOPe 2.06: d3rpta1, d3rpta2 - Chain 'X':
Compound: endoglucanase e-2
Species: THERMOBIFIDA FUSCA [TaxId:2021]
Gene: CELB
Database cross-references and differences (RAF-indexed):
- Uniprot P26222 (Start-70)
- see remark 999 (40-42)
- see remark 999 (71-73)
- see remark 999 (82-87)
- Uniprot P26222 (88-105)
- see remark 999 (106-107)
- see remark 999 (119-124)
- Uniprot P26222 (125-273)
- see remark 999 (157-158)
- see remark 999 (161)
- see remark 999 (218)
- expression tag (274)
Domains in SCOPe 2.06: d3rptx1, d3rptx2 - Heterogens: SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3rptA (A:)
dspfyvnpnmssaewvrnnpndprtpvirdriasvpqgtwhnqhnpgqitgqvdalmsaa
qaagkipilvvnpdpggdmdngfeegkqwidefaaglknrpayiivdpggsggdpeiaea
awrfaayagkalkagssqariyfdaghsawhspaqmaaalqradisnsahgiatntsnyr
wtadevayakavlsaignpslravidtsrngngpagnescdpsgraigtpsttntgdpmi
daflwiklpgeadgciagagqfvpqaayemaiaalehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>3rptA (A:)
dspfyvnpnmssaewvrnnpndprtpvirdriasvpqgtwhnqhqitgqvdalmsaaqaa
gkipilvvnpfeegkqwidefaaglknrpayiivdpgawrfaayagkalkagssqariyf
daghsawhspaqmaaalqradisnsahgiatntsnyrwtadevayakavlsaignpslra
vidtsrngngpagnescdpsgraigtpsttntgdpmidaflwiklpgeadgciagagqfv
pqaayemaiaale
- Chain 'X':
Sequence, based on SEQRES records: (download)
>3rptX (X:)
dspfyvnpnmssaewvrnnpndprtpvirdriasvpqgtwhnqhnpgqitgqvdalmsaa
qaagkipilvvnpdpggdmdngfeegkqwidefaaglknrpayiivdpggsggdpeiaea
awrfaayagkalkagssqariyfdaghsawhspaqmaaalqradisnsahgiatntsnyr
wtadevayakavlsaignpslravidtsrngngpagnescdpsgraigtpsttntgdpmi
daflwiklpgeadgciagagqfvpqaayemaiaalehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>3rptX (X:)
spfyvnpnmssaewvrnnpndprtpvirdriasvpqgtwhnqgqitgqvdalmsaaqaag
kipilvvnpdfeegkqwidefaaglknrpayiivdpaawrfaayagkalkagssqariyf
daghsawhspaqmaaalqradisnsahgiatntsnyrwtadevayakavlsaignpslra
vidtsrngngpagnescdpsgraigtpsttntgdpmidaflwiklpgeadgciagagqfv
pqaayemaiaal