PDB entry 3oha

View 3oha on RCSB PDB site
Description: Yeast DNA polymerase eta inserting dCTP opposite an 8oxoG lesion
Class: transferase/DNA
Keywords: Protein-DNA complex, Nucleotidyltransferase, DNA-directed DNA polymerase, DNA replication, DNA repair, DNA binding, nucleotide binding, metal binding, Nucleus, TRANSFERASE-DNA complex
Deposited on 2010-08-17, released 2010-12-22
The last revision prior to the SCOPe 2.04 freeze date was dated 2010-12-22, with a file datestamp of 2010-12-17.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.159
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA Polymerase ETA
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: DBH1, RAD30, YDR419W
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q04049 (7-End)
      • expression tag (3-6)
      • engineered mutation (146)
      • engineered mutation (150)
    Domains in SCOPe 2.04: d3ohaa1, d3ohaa2
  • Chain 'P':
    Compound: 5'-d(*gp*tp*cp*cp*tp*cp*cp*cp*cp*tp*(doc))-3'
  • Chain 'T':
    Compound: 5'-d(p*tp*(8og)p*gp*ap*gp*gp*gp*gp*ap*gp*gp*ap*c)-3'
  • Heterogens: DCP, SO4, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3ohaA (A:)
gpggdphmskftwkeliqlgspskayesslaciahidmnaffaqveqmrcglskedpvvc
vqwnsiiavsyaarkygisrmdtiqealkkcsnlipihtavfkkgedfwqyhdgcgswvq
dpakqisvedhkvslepyrresrkalaifkwacdlverasidevfldlgricfnmlmfdn
eyeltgdlklkdalsnireafiggnydinshlplipekikslkfegdvfnpegrdlitdw
ddvilalgsqvckgirdsikdilgyttscglsstknvcklasnykkpdaqtivkndclld
fldcgkfeitsfwtlggvlgkelidvldlphensikhiretwpdnagqlkefldakvkqs
dydrstsnidplktadlaeklfklsrgryglplssrpvvksmmsnknlrgkscnsivdci
swlevfcaeltsriqdleqeynkiviprtvsislktksyevyrksgpvaykginfqshel
lkvgikfvtdldikgknksyypltklsmtitnfdiidlqk

    Sequence, based on observed residues (ATOM records): (download) 
    >3ohaA (A:)
gdphmskftwkeliqlgspskayesslaciahidmnaffaqveqmrcglskedpvvcvqw
nsiiavsyaarkygisrmdtiqealkkcsnlipihtavfkkgedfwqyhdgcgswvqdpa
kqisvedhkvslepyrresrkalaifkwacdlverasidevfldlgricfnmlmfdneye
ltgdlklkdalsnireafiggnydinshlplipekikslkfegdvfnpegrdlitdwddv
ilalgsqvckgirdsikdilgyttscglsstknvcklasnykkpdaqtivkndclldfld
cgkfeitsfwtlggvlgkelidvldlphensikhiretwpdnagqlkefldakvkqsdyd
rstsnidplktadlaeklfklsrgryglplssrpvvksmmsnknlrgkscnsivdciswl
evfcaeltsriqdleqeynkiviprtvsislktksyevyrksgpvaykginfqshellkv
gikfvtdldikgknksyypltklsmtitnfdiidlq

  • Chain 'P':
    No sequence available.

  • Chain 'T':
    No sequence available.