PDB entry 3lmt

View 3lmt on RCSB PDB site
Description: Crystal strucutre of DTD from Plasmodium falciparum
Class: hydrolase
Keywords: dtd, deacylase, hydrolase, iodide
Deposited on 2010-02-01, released 2010-03-02
The last revision prior to the SCOPe 2.03 freeze date was dated 2010-10-27, with a file datestamp of 2010-10-22.
Experiment type: XRAY
Resolution: 2.75 Å
R-factor: 0.184
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: D-tyrosyl-tRNA(Tyr) deacylase
    Species: PLASMODIUM FALCIPARUM [TaxId:36329]
    Gene: DTD, PF11_0095
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d3lmta_
  • Chain 'B':
    Compound: D-tyrosyl-tRNA(Tyr) deacylase
    Species: PLASMODIUM FALCIPARUM [TaxId:36329]
    Gene: DTD, PF11_0095
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d3lmtb_
  • Chain 'C':
    Compound: D-tyrosyl-tRNA(Tyr) deacylase
    Species: PLASMODIUM FALCIPARUM [TaxId:36329]
    Gene: DTD, PF11_0095
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d3lmtc_
  • Chain 'D':
    Compound: D-tyrosyl-tRNA(Tyr) deacylase
    Species: PLASMODIUM FALCIPARUM [TaxId:36329]
    Gene: DTD, PF11_0095
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d3lmtd_
  • Chain 'E':
    Compound: D-tyrosyl-tRNA(Tyr) deacylase
    Species: PLASMODIUM FALCIPARUM [TaxId:36329]
    Gene: DTD, PF11_0095
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d3lmte_
  • Chain 'F':
    Compound: D-tyrosyl-tRNA(Tyr) deacylase
    Species: PLASMODIUM FALCIPARUM [TaxId:36329]
    Gene: DTD, PF11_0095
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d3lmtf_
  • Heterogens: IOD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3lmtA (A:)
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defkkqynddkikigkfgnymnidvtndgpvtiyidthdinlnk

    Sequence, based on observed residues (ATOM records): (download) 
    >3lmtA (A:)
mrvviqrvkgailsvrkenigenekeleiiseiknglicflgihkndtwedalyiirkcl
nlrlwnndnktwdknvkdlnyellivsqftlfgntkkgnkpdfhlakepnealifynkii
defkkqynddkikigkfgnymnidvtndgpvtiyidthdinl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3lmtB (B:)
mrvviqrvkgailsvrkenigenekeleiiseiknglicflgihkndtwedalyiirkcl
nlrlwnndnktwdknvkdlnyellivsqftlfgntkkgnkpdfhlakepnealifynkii
defkkqynddkikigkfgnymnidvtndgpvtiyidthdinlnk

    Sequence, based on observed residues (ATOM records): (download) 
    >3lmtB (B:)
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ktwdknvkdlnyellivsqftlfgntkkgnkpdfhlakepnealifynkiidefkkqynd
dkikigkfgnymnidvtndgpvtiyidthdin

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3lmtC (C:)
mrvviqrvkgailsvrkenigenekeleiiseiknglicflgihkndtwedalyiirkcl
nlrlwnndnktwdknvkdlnyellivsqftlfgntkkgnkpdfhlakepnealifynkii
defkkqynddkikigkfgnymnidvtndgpvtiyidthdinlnk

    Sequence, based on observed residues (ATOM records): (download) 
    >3lmtC (C:)
mrvviqrvkgailsvrkenigenekeleiiseiknglicflgihkndtwedalyiirkcl
nlrlwnndnktwdknvkdlnyellivsqftlfgntkkgnkpdfhlakepnealifynkii
defkkqynddkikigkfgnymnidvtndgpvtiyidthdin

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3lmtD (D:)
mrvviqrvkgailsvrkenigenekeleiiseiknglicflgihkndtwedalyiirkcl
nlrlwnndnktwdknvkdlnyellivsqftlfgntkkgnkpdfhlakepnealifynkii
defkkqynddkikigkfgnymnidvtndgpvtiyidthdinlnk

    Sequence, based on observed residues (ATOM records): (download) 
    >3lmtD (D:)
mrvviqrvkgailsvrkleiiseiknglicflgihkndtwedalyiirkclnlrlwnndn
ktwdknvkdlnyellivsqftlfgntkkgnkpdfhlakepnealifynkiidefkkqynd
dkikigkfgnymnidvtndgpvtiyidthdi

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3lmtE (E:)
mrvviqrvkgailsvrkenigenekeleiiseiknglicflgihkndtwedalyiirkcl
nlrlwnndnktwdknvkdlnyellivsqftlfgntkkgnkpdfhlakepnealifynkii
defkkqynddkikigkfgnymnidvtndgpvtiyidthdinlnk

    Sequence, based on observed residues (ATOM records): (download) 
    >3lmtE (E:)
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twdknvkdlnyellivsqftlfgntkkgnkpdfhlakepnealifynkiidefkkqyndd
kikigkfgnymnidvtndgpvtiyidthdi

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3lmtF (F:)
mrvviqrvkgailsvrkenigenekeleiiseiknglicflgihkndtwedalyiirkcl
nlrlwnndnktwdknvkdlnyellivsqftlfgntkkgnkpdfhlakepnealifynkii
defkkqynddkikigkfgnymnidvtndgpvtiyidthdinlnk

    Sequence, based on observed residues (ATOM records): (download) 
    >3lmtF (F:)
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nddkikigkfgnymnidvtndgpvtiyidthd