PDB entry 3lbm

View 3lbm on RCSB PDB site
Description: D-sialic acid aldolase
Class: lyase
Keywords: Tim barrel, Carbohydrate metabolism, Lyase, Schiff base
Deposited on 2010-01-08, released 2011-01-19
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-01-19, with a file datestamp of 2011-01-14.
Experiment type: XRAY
Resolution: 1.48 Å
R-factor: 0.186
AEROSPACI score: 0.66 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: n-acetylneuraminate lyase
    Species: Escherichia coli [TaxId:83333]
    Gene: b3225, JW3194, nanA, npl
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3lbma_
  • Chain 'B':
    Compound: n-acetylneuraminate lyase
    Species: Escherichia coli [TaxId:83333]
    Gene: b3225, JW3194, nanA, npl
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3lbmb_
  • Chain 'C':
    Compound: n-acetylneuraminate lyase
    Species: Escherichia coli [TaxId:83333]
    Gene: b3225, JW3194, nanA, npl
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3lbmc_
  • Chain 'D':
    Compound: n-acetylneuraminate lyase
    Species: Escherichia coli [TaxId:83333]
    Gene: b3225, JW3194, nanA, npl
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3lbmd_
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3lbmA (A:)
mghhhhhhhhhhssghiegrhmmatnlrgvmaalltpfdqqqaldkaslrrlvqfniqqg
idglyvggstgeafvqslsereqvleivaeeakgkikliahvgcvstaesqqlaasakry
gfdavsavtpfyypfsfeehcdhyraiidsadglpmvvynipalsgvkltldqintlvtl
pgvgalkqtsgdlyqmeqirrehpdlvlyngydeifasgllagadggigstynimgwryq
givkalkegdiqtaqklqtecnkvidlliktgvfrglktvlhymdvvsvplcrkpfgpvd
ekylpelkalaqqlmqerg

    Sequence, based on observed residues (ATOM records): (download) 
    >3lbmA (A:)
atnlrgvmaalltpfdqqqaldkaslrrlvqfniqqgidglyvggstgeafvqslsereq
vleivaeeakgkikliahvgcvstaesqqlaasakrygfdavsavtpfyypfsfeehcdh
yraiidsadglpmvvynipalsgvkltldqintlvtlpgvgalkqtsgdlyqmeqirreh
pdlvlyngydeifasgllagadggigstynimgwryqgivkalkegdiqtaqklqtecnk
vidlliktgvfrglktvlhymdvvsvplcrkpfgpvdekylpelkalaqqlmqer

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3lbmB (B:)
mghhhhhhhhhhssghiegrhmmatnlrgvmaalltpfdqqqaldkaslrrlvqfniqqg
idglyvggstgeafvqslsereqvleivaeeakgkikliahvgcvstaesqqlaasakry
gfdavsavtpfyypfsfeehcdhyraiidsadglpmvvynipalsgvkltldqintlvtl
pgvgalkqtsgdlyqmeqirrehpdlvlyngydeifasgllagadggigstynimgwryq
givkalkegdiqtaqklqtecnkvidlliktgvfrglktvlhymdvvsvplcrkpfgpvd
ekylpelkalaqqlmqerg

    Sequence, based on observed residues (ATOM records): (download) 
    >3lbmB (B:)
atnlrgvmaalltpfdqqqaldkaslrrlvqfniqqgidglyvggstgeafvqslsereq
vleivaeeakgkikliahvgcvstaesqqlaasakrygfdavsavtpfyypfsfeehcdh
yraiidsadglpmvvynipalsgvkltldqintlvtlpgvgalkqtsgdlyqmeqirreh
pdlvlyngydeifasgllagadggigstynimgwryqgivkalkegdiqtaqklqtecnk
vidlliktgvfrglktvlhymdvvsvplcrkpfgpvdekylpelkalaqqlmqer

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3lbmC (C:)
mghhhhhhhhhhssghiegrhmmatnlrgvmaalltpfdqqqaldkaslrrlvqfniqqg
idglyvggstgeafvqslsereqvleivaeeakgkikliahvgcvstaesqqlaasakry
gfdavsavtpfyypfsfeehcdhyraiidsadglpmvvynipalsgvkltldqintlvtl
pgvgalkqtsgdlyqmeqirrehpdlvlyngydeifasgllagadggigstynimgwryq
givkalkegdiqtaqklqtecnkvidlliktgvfrglktvlhymdvvsvplcrkpfgpvd
ekylpelkalaqqlmqerg

    Sequence, based on observed residues (ATOM records): (download) 
    >3lbmC (C:)
tnlrgvmaalltpfdqqqaldkaslrrlvqfniqqgidglyvggstgeafvqslsereqv
leivaeeakgkikliahvgcvstaesqqlaasakrygfdavsavtpfyypfsfeehcdhy
raiidsadglpmvvynipalsgvkltldqintlvtlpgvgalkqtsgdlyqmeqirrehp
dlvlyngydeifasgllagadggigstynimgwryqgivkalkegdiqtaqklqtecnkv
idlliktgvfrglktvlhymdvvsvplcrkpfgpvdekylpelkalaqqlmqer

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3lbmD (D:)
mghhhhhhhhhhssghiegrhmmatnlrgvmaalltpfdqqqaldkaslrrlvqfniqqg
idglyvggstgeafvqslsereqvleivaeeakgkikliahvgcvstaesqqlaasakry
gfdavsavtpfyypfsfeehcdhyraiidsadglpmvvynipalsgvkltldqintlvtl
pgvgalkqtsgdlyqmeqirrehpdlvlyngydeifasgllagadggigstynimgwryq
givkalkegdiqtaqklqtecnkvidlliktgvfrglktvlhymdvvsvplcrkpfgpvd
ekylpelkalaqqlmqerg

    Sequence, based on observed residues (ATOM records): (download) 
    >3lbmD (D:)
atnlrgvmaalltpfdqqqaldkaslrrlvqfniqqgidglyvggstgeafvqslsereq
vleivaeeakgkikliahvgcvstaesqqlaasakrygfdavsavtpfyypfsfeehcdh
yraiidsadglpmvvynipalsgvkltldqintlvtlpgvgalkqtsgdlyqmeqirreh
pdlvlyngydeifasgllagadggigstynimgwryqgivkalkegdiqtaqklqtecnk
vidlliktgvfrglktvlhymdvvsvplcrkpfgpvdekylpelkalaqqlmqer