PDB entry 3l8q

View 3l8q on RCSB PDB site
Description: Structure analysis of the type II cohesin dyad from the adaptor ScaA scaffoldin of Acetivibrio cellulolyticus
Class: structural protein, protein binding
Keywords: Dockerin-binding module, protein-protein interactions, linker segment, scaffoldin arrangement, beta sandwich, alpha helix, beta flaps, STRUCTURAL PROTEIN, PROTEIN BINDING
Deposited on 2010-01-03, released 2010-05-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-01, with a file datestamp of 2017-10-27.
Experiment type: XRAY
Resolution: 1.57 Å
R-factor: N/A
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cellulosomal scaffoldin adaptor protein B
    Species: Acetivibrio cellulolyticus [TaxId:35830]
    Gene: ScaB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7WYN3 (1-End)
      • expression tag (0)
      • see remark 999 (169)
    Domains in SCOPe 2.08: d3l8qa1, d3l8qa2, d3l8qa3
  • Chain 'B':
    Compound: Cellulosomal scaffoldin adaptor protein B
    Species: Acetivibrio cellulolyticus [TaxId:35830]
    Gene: ScaB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7WYN3 (1-End)
      • expression tag (0)
      • see remark 999 (169)
    Domains in SCOPe 2.08: d3l8qb1, d3l8qb2, d3l8qb3
  • Chain 'C':
    Compound: Cellulosomal scaffoldin adaptor protein B
    Species: Acetivibrio cellulolyticus [TaxId:35830]
    Gene: ScaB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7WYN3
      • see remark 999 (169)
    Domains in SCOPe 2.08: d3l8qc1, d3l8qc2
  • Chain 'D':
    Compound: Cellulosomal scaffoldin adaptor protein B
    Species: Acetivibrio cellulolyticus [TaxId:35830]
    Gene: ScaB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7WYN3
      • see remark 999 (169)
    Domains in SCOPe 2.08: d3l8qd1, d3l8qd2
  • Heterogens: EDO, PDO, HEZ, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3l8qA (A:)
maptssieivldkttasvgeivtasiniknitnfsgcqlnmkydpavlqpvtssgvaytk
stmpgagtilnsdfnlrqvadndlekgilnfskayvslddyrtaaapeqtgtvavvkfkv
lkeetssisfedttsvpnaidgtvlfdwngdriqsgysviqpavinldmtkasyitmgyd
knaaevgeiikatvkinkitnfsgyqvnikydptvlqavnpktgvaytnsslptsgellv
sedygpivqgvhkisegilnlsrsytalevyrasespeetgtlavvgfkvlqkkattvvf
edsetmpngitgttlfnwygnriqsgyfviqpgeinsapiatlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3l8qA (A:)
maptssieivldkttasvgeivtasiniknitnfsgcqlnmkydpavlqpvtssgvaytk
stmpgagtilnsdfnlrqvadndlekgilnfskayvslddyrtaaapeqtgtvavvkfkv
lkeetssisfedttsvpnaidgtvlfdwngdriqsgysviqpavinldmtkasyitmgyd
knaaevgeiikatvkinkitnfsgyqvnikydptvlqavnpktgvaytnsslptsgellv
sedygpivqgvhkisegilnlsrsytalevyrasespeetgtlavvgfkvlqkkattvvf
edsetmpngitgttlfnwygnriqsgyfviqpgeinsa

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3l8qB (B:)
maptssieivldkttasvgeivtasiniknitnfsgcqlnmkydpavlqpvtssgvaytk
stmpgagtilnsdfnlrqvadndlekgilnfskayvslddyrtaaapeqtgtvavvkfkv
lkeetssisfedttsvpnaidgtvlfdwngdriqsgysviqpavinldmtkasyitmgyd
knaaevgeiikatvkinkitnfsgyqvnikydptvlqavnpktgvaytnsslptsgellv
sedygpivqgvhkisegilnlsrsytalevyrasespeetgtlavvgfkvlqkkattvvf
edsetmpngitgttlfnwygnriqsgyfviqpgeinsapiatlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3l8qB (B:)
maptssieivldkttasvgeivtasiniknitnfsgcqlnmkydpavlqpvtssgvaytk
stmpgagtilnsdfnlrqvadndlekgilnfskayvslddyrtaaapeqtgtvavvkfkv
lkeetssisfedttsvpnaidgtvlfdwngdriqsgysviqpavinldmtkasyitmgyd
knaaevgeiikatvkinkitnfsgyqvnikydptvlqavnpktgvaytnsslptsgellv
sedygpivqgvhkisegilnlsrsytalevyrasespeetgtlavvgfkvlqkkattvvf
edsetmpngitgttlfnwygnriqsgyfviqpgeinsapia

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3l8qC (C:)
maptssieivldkttasvgeivtasiniknitnfsgcqlnmkydpavlqpvtssgvaytk
stmpgagtilnsdfnlrqvadndlekgilnfskayvslddyrtaaapeqtgtvavvkfkv
lkeetssisfedttsvpnaidgtvlfdwngdriqsgysviqpavinldmtkasyitmgyd
knaaevgeiikatvkinkitnfsgyqvnikydptvlqavnpktgvaytnsslptsgellv
sedygpivqgvhkisegilnlsrsytalevyrasespeetgtlavvgfkvlqkkattvvf
edsetmpngitgttlfnwygnriqsgyfviqpgeinsapiatlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3l8qC (C:)
ptssieivldkttasvgeivtasiniknitnfsgcqlnmkydpavlqpvtssgvaytkst
mpgagtilnsdfnlrqvadndlekgilnfskayvslddyrtaaapeqtgtvavvkfkvlk
eetssisfedttsvpnaidgtvlfdwngdriqsgysviqpavinldmtkasyitmgydkn
aaevgeiikatvkinkitnfsgyqvnikydptvlqavnpktgvaytnsslptsgellvse
dygpivqgvhkisegilnlsrsytalevyrasespeetgtlavvgfkvlqkkattvvfed
setmpngitgttlfnwygnriqsgyfviqpgeins

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3l8qD (D:)
maptssieivldkttasvgeivtasiniknitnfsgcqlnmkydpavlqpvtssgvaytk
stmpgagtilnsdfnlrqvadndlekgilnfskayvslddyrtaaapeqtgtvavvkfkv
lkeetssisfedttsvpnaidgtvlfdwngdriqsgysviqpavinldmtkasyitmgyd
knaaevgeiikatvkinkitnfsgyqvnikydptvlqavnpktgvaytnsslptsgellv
sedygpivqgvhkisegilnlsrsytalevyrasespeetgtlavvgfkvlqkkattvvf
edsetmpngitgttlfnwygnriqsgyfviqpgeinsapiatlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3l8qD (D:)
tssieivldkttasvgeivtasiniknitnfsgcqlnmkydpavlqpvtssgvaytkstm
pgagtilnsdfnlrqvadndlekgilnfskayvslddyrtaaapeqtgtvavvkfkvlke
etssisfedttsvpnaidgtvlfdwngdriqsgysviqpavinldmtkasyitmgydkna
aevgeiikatvkinkitnfsgyqvnikydptvlqavnpktgvaytnsslptsgellvsed
ygpivqgvhkisegilnlsrsytalevyrasespeetgtlavvgfkvlqkkattvvfeds
etmpngitgttlfnwygnriqsgyfviqpgeinsapi