PDB entry 3knz

View 3knz on RCSB PDB site
Description: Crystal structure of Putative sugar binding protein (NP_459565.1) from Salmonella typhimurium LT2 at 2.50 A resolution
Class: sugar binding protein
Keywords: Putative sugar binding protein, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, SUGAR BINDING PROTEIN
Deposited on 2009-11-12, released 2009-12-01
The last revision prior to the SCOPe 2.04 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.205
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative sugar binding protein
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:90371]
    Gene: STM0573
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZR49 (20-End)
      • expression tag (13-19)
    Domains in SCOPe 2.04: d3knza_
  • Chain 'B':
    Compound: Putative sugar binding protein
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:90371]
    Gene: STM0573
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZR49 (20-End)
      • expression tag (13-19)
    Domains in SCOPe 2.04: d3knzb_
  • Chain 'C':
    Compound: Putative sugar binding protein
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:90371]
    Gene: STM0573
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZR49 (20-End)
      • expression tag (13-19)
    Domains in SCOPe 2.04: d3knzc_
  • Chain 'D':
    Compound: Putative sugar binding protein
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:90371]
    Gene: STM0573
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZR49 (20-End)
      • expression tag (13-19)
    Domains in SCOPe 2.04: d3knzd_
  • Chain 'E':
    Compound: Putative sugar binding protein
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:90371]
    Gene: STM0573
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZR49 (20-End)
      • expression tag (13-19)
    Domains in SCOPe 2.04: d3knze_
  • Chain 'F':
    Compound: Putative sugar binding protein
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:90371]
    Gene: STM0573
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZR49 (20-End)
      • expression tag (15-19)
    Domains in SCOPe 2.04: d3knzf_
  • Heterogens: ETX, IMD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3knzA (A:)
mgsdkihhhhhhenlyfqgmnetplrllemltqtredlwraaqaltergvtriiltgsgt
syhgaltartfmqrwcalpvdvcwpfmlddetlarsgkalvvgisqgggslstlaamera
rnvghitasmagvapatidraadyiltvpcgeetagaktkgyhctvlnlmllalavagqq
qrldgeqrrslllrmektfnhlpalvtasqawaqtnalalrdsadirltgpatlfgtvqe
galkmletlrcpvsgyefeefihgiynafnaqsalimldpqpdarqdrlaqilgewtpsi
yrigpqvennglnlnfpfvndedfavfeyiiplqmlcailppqkginpaipkdpqfhqkm
kskqei

    Sequence, based on observed residues (ATOM records): (download) 
    >3knzA (A:)
nlyfqgmnetplrllemltqtredlwraaqaltergvtriiltgsgtsyhgaltartfmq
rwcalpvdvcwpfmlddetlarsgkalvvgisqgggslstlaamerarnvghitasmagv
apatidraadyiltvpcgetkgyhctvlnlmllalavagqqqrldgeqrrslllrmektf
nhlpalvtasqawaqtnalalrdsadirltgpatlfgtvqegalkmletlrcpvsgyefe
efihgiynafnaqsalimldpqpdarqdrlaqilgewtpsiyrigpqvennglnlnfpfv
ndedfavfeyiiplqmlcailp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3knzB (B:)
mgsdkihhhhhhenlyfqgmnetplrllemltqtredlwraaqaltergvtriiltgsgt
syhgaltartfmqrwcalpvdvcwpfmlddetlarsgkalvvgisqgggslstlaamera
rnvghitasmagvapatidraadyiltvpcgeetagaktkgyhctvlnlmllalavagqq
qrldgeqrrslllrmektfnhlpalvtasqawaqtnalalrdsadirltgpatlfgtvqe
galkmletlrcpvsgyefeefihgiynafnaqsalimldpqpdarqdrlaqilgewtpsi
yrigpqvennglnlnfpfvndedfavfeyiiplqmlcailppqkginpaipkdpqfhqkm
kskqei

    Sequence, based on observed residues (ATOM records): (download) 
    >3knzB (B:)
nlyfqgmnetplrllemltqtredlwraaqaltergvtriiltgsgtsyhgaltartfmq
rwcalpvdvcwpfmlddetlarsgkalvvgisqgggslstlaamerarnvghitasmagv
apatidraadyiltvpcgetkgyhctvlnlmllalavagqqqrldgeqrrslllrmektf
nhlpalvtasqawaqtnalalrdsadirltgpatlfgtvqegalkmletlrcpvsgyefe
efihgiynafnaqsalimldpqpdarqdrlaqilgewtpsiyrigpqvennglnlnfpfv
ndedfavfeyiiplqmlcail

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3knzC (C:)
mgsdkihhhhhhenlyfqgmnetplrllemltqtredlwraaqaltergvtriiltgsgt
syhgaltartfmqrwcalpvdvcwpfmlddetlarsgkalvvgisqgggslstlaamera
rnvghitasmagvapatidraadyiltvpcgeetagaktkgyhctvlnlmllalavagqq
qrldgeqrrslllrmektfnhlpalvtasqawaqtnalalrdsadirltgpatlfgtvqe
galkmletlrcpvsgyefeefihgiynafnaqsalimldpqpdarqdrlaqilgewtpsi
yrigpqvennglnlnfpfvndedfavfeyiiplqmlcailppqkginpaipkdpqfhqkm
kskqei

    Sequence, based on observed residues (ATOM records): (download) 
    >3knzC (C:)
nlyfqgmnetplrllemltqtredlwraaqaltergvtriiltgsgtsyhgaltartfmq
rwcalpvdvcwpfmlddetlarsgkalvvgisqgggslstlaamerarnvghitasmagv
apatidraadyiltvpcgtkgyhctvlnlmllalavagqqqrldgeqrrslllrmektfn
hlpalvtasqawaqtnalalrdsadirltgpatlfgtvqegalkmletlrcpvsgyefee
fihgiynafnaqsalimldpqpdarqdrlaqilgewtpsiyrigpqvennglnlnfpfvn
dedfavfeyiiplqmlcailp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3knzD (D:)
mgsdkihhhhhhenlyfqgmnetplrllemltqtredlwraaqaltergvtriiltgsgt
syhgaltartfmqrwcalpvdvcwpfmlddetlarsgkalvvgisqgggslstlaamera
rnvghitasmagvapatidraadyiltvpcgeetagaktkgyhctvlnlmllalavagqq
qrldgeqrrslllrmektfnhlpalvtasqawaqtnalalrdsadirltgpatlfgtvqe
galkmletlrcpvsgyefeefihgiynafnaqsalimldpqpdarqdrlaqilgewtpsi
yrigpqvennglnlnfpfvndedfavfeyiiplqmlcailppqkginpaipkdpqfhqkm
kskqei

    Sequence, based on observed residues (ATOM records): (download) 
    >3knzD (D:)
nlyfqgmnetplrllemltqtredlwraaqaltergvtriiltgsgtsyhgaltartfmq
rwcalpvdvcwpfmlddetlarsgkalvvgisqgggslstlaamerarnvghitasmagv
apatidraadyiltvpcgetkgyhctvlnlmllalavagqqqrldgeqrrslllrmektf
nhlpalvtasqawaqtnalalrdsadirltgpatlfgtvqegalkmletlrcpvsgyefe
efihgiynafnaqsalimldpqpdarqdrlaqilgewtpsiyrigpqvennglnlnfpfv
ndedfavfeyiiplqmlcailp

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3knzE (E:)
mgsdkihhhhhhenlyfqgmnetplrllemltqtredlwraaqaltergvtriiltgsgt
syhgaltartfmqrwcalpvdvcwpfmlddetlarsgkalvvgisqgggslstlaamera
rnvghitasmagvapatidraadyiltvpcgeetagaktkgyhctvlnlmllalavagqq
qrldgeqrrslllrmektfnhlpalvtasqawaqtnalalrdsadirltgpatlfgtvqe
galkmletlrcpvsgyefeefihgiynafnaqsalimldpqpdarqdrlaqilgewtpsi
yrigpqvennglnlnfpfvndedfavfeyiiplqmlcailppqkginpaipkdpqfhqkm
kskqei

    Sequence, based on observed residues (ATOM records): (download) 
    >3knzE (E:)
nlyfqgmnetplrllemltqtredlwraaqaltergvtriiltgsgtsyhgaltartfmq
rwcalpvdvcwpfmlddetlarsgkalvvgisqgggslstlaamerarnvghitasmagv
apatidraadyiltvpcgetkgyhctvlnlmllalavagqqqrldgeqrrslllrmektf
nhlpalvtasqawaqtnalalrdsadirltgpatlfgtvqegalkmletlrcpvsgyefe
efihgiynafnaqsalimldpqpdarqdrlaqilgewtpsiyrigpqvennglnlnfpfv
ndedfavfeyiiplqmlcailp

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3knzF (F:)
mgsdkihhhhhhenlyfqgmnetplrllemltqtredlwraaqaltergvtriiltgsgt
syhgaltartfmqrwcalpvdvcwpfmlddetlarsgkalvvgisqgggslstlaamera
rnvghitasmagvapatidraadyiltvpcgeetagaktkgyhctvlnlmllalavagqq
qrldgeqrrslllrmektfnhlpalvtasqawaqtnalalrdsadirltgpatlfgtvqe
galkmletlrcpvsgyefeefihgiynafnaqsalimldpqpdarqdrlaqilgewtpsi
yrigpqvennglnlnfpfvndedfavfeyiiplqmlcailppqkginpaipkdpqfhqkm
kskqei

    Sequence, based on observed residues (ATOM records): (download) 
    >3knzF (F:)
yfqgmnetplrllemltqtredlwraaqaltergvtriiltgsgtsyhgaltartfmqrw
calpvdvcwpfmlddetlarsgkalvvgisqgggslstlaamerarnvghitasmagvap
atidraadyiltvptkgyhctvlnlmllalavagqqqrldgeqrrslllrmektfnhlpa
lvtasqawaqtnalalrdsadirltgpatlfgtvqegalkmletlrcpvsgyefeefihg
iynafnaqsalimldpqpdarqdrlaqilgewtpsiyrigpqvennglnlnfpfvndedf
avfeyiiplqmlcailp