PDB entry 3jrd
View 3jrd on RCSB PDB site
Description: Crystal structure of Fis bound to 27 bp DNA F25 containing T2A3 sequence at center
Class: DNA binding protein/DNA
Keywords: HTH domain, Protein-DNA complex, minor groove compression, DNA bending, indirect recognition, activator, DNA-binding, Transcription, Transcription regulatio, DNA BINDING PROTEIN-DNA COMPLEX
Deposited on
2009-09-08, released
2010-04-28
The last revision prior to the SCOPe 2.07 freeze date was dated
2017-11-01, with a file datestamp of
2017-10-27.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.12
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: DNA-binding protein fis
Species: Escherichia coli [TaxId:83333]
Gene: fis, b3261, JW3229
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3jrda_ - Chain 'B':
Compound: DNA-binding protein fis
Species: Escherichia coli [TaxId:83333]
Gene: fis, b3261, JW3229
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3jrdb_ - Chain 'C':
Compound: DNA (27-mer)
- Chain 'D':
Compound: DNA (27-mer)
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3jrdA (A:)
mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveq
plldmvmqytrgnqtraalmmginrgtlrkklkkygmn
Sequence, based on observed residues (ATOM records): (download)
>3jrdA (A:)
sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvm
qytrgnqtraalmmginrgtlrkklkkygmn
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>3jrdB (B:)
mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveq
plldmvmqytrgnqtraalmmginrgtlrkklkkygmn
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.