PDB entry 3ivq

View 3ivq on RCSB PDB site
Description: Structures of SPOP-Substrate Complexes: Insights into Molecular Architectures of BTB-Cul3 Ubiquitin Ligases: SPOPMATH-CiSBC2
Class: ligase
Keywords: Protein Binding, Nucleus, Ubl conjugation pathway, LIGASE
Deposited on 2009-09-01, released 2009-10-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-10-20, with a file datestamp of 2009-10-16.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.234
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Speckle-type POZ protein
    Species: Homo sapiens [TaxId:9606]
    Gene: SPOP
    Database cross-references and differences (RAF-indexed):
    • Uniprot O43791 (6-144)
      • expression tag (3-5)
    Domains in SCOPe 2.08: d3ivqa1, d3ivqa2
  • Chain 'B':
    Compound: Speckle-type POZ protein
    Species: Homo sapiens [TaxId:9606]
    Gene: SPOP
    Database cross-references and differences (RAF-indexed):
    • Uniprot O43791 (6-144)
      • expression tag (4-5)
    Domains in SCOPe 2.08: d3ivqb1, d3ivqb2
  • Chain 'C':
    Compound: CiSBC2
    Database cross-references and differences (RAF-indexed):
    • PDB 3IVQ (Start-11)
  • Chain 'D':
    Compound: CiSBC2
    Database cross-references and differences (RAF-indexed):
    • PDB 3IVQ
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3ivqA (A:)
gsggsgkvvkfsymwtinnfsfcreemgeviksstfssgandklkwclrvnpkgldeesk
dylslylllvscpksevrakfkfsilnakgeetkamesqrayrfvqgkdwgfkkfirrdf
lldeangllpddkltlfcevsvvqd

    Sequence, based on observed residues (ATOM records): (download) 
    >3ivqA (A:)
gsgkvvkfsymwtinnfsfcreemgeviksstfssgaklkwclrvnpkgldeeskdylsl
ylllvscpksevrakfkfsilnakgeetkamesqrayrfvqgkdwgfkkfirrdflldea
ngllpddkltlfcevsvvqd

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3ivqB (B:)
gsggsgkvvkfsymwtinnfsfcreemgeviksstfssgandklkwclrvnpkgldeesk
dylslylllvscpksevrakfkfsilnakgeetkamesqrayrfvqgkdwgfkkfirrdf
lldeangllpddkltlfcevsvvqd

    Sequence, based on observed residues (ATOM records): (download) 
    >3ivqB (B:)
sgkvvkfsymwtinnfsfcreemgeviksstfssgklkwclrvnpkgldeeskdylslyl
llvscpksevrakfkfsilnakgeetkamesqrayrfvqgkdwgfkkfirrdflldeang
llpddkltlfcevsvvqd

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.