PDB entry 3ir8

View 3ir8 on RCSB PDB site
Description: Red fluorescent protein mKeima at pH 7.0
Class: fluorescent protein
Keywords: beta barrel, FLUORESCENT PROTEIN
Deposited on 2009-08-21, released 2009-09-08
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-10-20, with a file datestamp of 2009-10-16.
Experiment type: XRAY
Resolution: 1.63 Å
R-factor: 0.195
AEROSPACI score: 0.55 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Large stokes shift fluorescent protein
    Species: Montipora sp. 20 [TaxId:321802]
    Gene: m-keima
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q1JV70
      • chromophore (65)
    Domains in SCOPe 2.04: d3ir8a_
  • Chain 'B':
    Compound: Large stokes shift fluorescent protein
    Species: Montipora sp. 20 [TaxId:321802]
    Gene: m-keima
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q1JV70
      • chromophore (65)
    Domains in SCOPe 2.04: d3ir8b_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3ir8A (A:)
ssvsviakqmtykvymsgtvnghyfevegdgkgkpyegeqtvkltvtkggplpfawdils
pqlqygsipftkypedipdyfkqsfpegytwersmnfedgavctvsndssiqgncfiynv
kisgenfppngpvmqkktqgwepsterlfardgmligndymalkleggghylcefkstyk
akkpvrmpgrheidrkldvtshnrdytsveqceiaiarhsllg

    Sequence, based on observed residues (ATOM records): (download) 
    >3ir8A (A:)
viakqmtykvymsgtvnghyfevegdgkgkpyegeqtvkltvtkggplpfawdilspqlq
ygsipftkypedipdyfkqsfpegytwersmnfedgavctvsndssiqgncfiynvkisg
enfppngpvmqkktqgwepsterlfardgmligndymalkleggghylcefkstykakkp
vrmpgrheidrkldvtshnrdytsveqceiaiarhs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3ir8B (B:)
ssvsviakqmtykvymsgtvnghyfevegdgkgkpyegeqtvkltvtkggplpfawdils
pqlqygsipftkypedipdyfkqsfpegytwersmnfedgavctvsndssiqgncfiynv
kisgenfppngpvmqkktqgwepsterlfardgmligndymalkleggghylcefkstyk
akkpvrmpgrheidrkldvtshnrdytsveqceiaiarhsllg

    Sequence, based on observed residues (ATOM records): (download) 
    >3ir8B (B:)
sviakqmtykvymsgtvnghyfevegdgkgkpyegeqtvkltvtkggplpfawdilspql
qygsipftkypedipdyfkqsfpegytwersmnfedgavctvsndssiqgncfiynvkis
genfppngpvmqkktqgwepsterlfardgmligndymalkleggghylcefkstykakk
pvrmpgrheidrkldvtshnrdytsveqceiaiarhs