PDB entry 3ij5

View 3ij5 on RCSB PDB site
Description: 1.95 Angstrom Resolution Crystal Structure of 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase from Yersinia pestis
Class: hydrolase
Keywords: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, idp02274, Hydrolase, Lipopolysaccharide biosynthesis, Magnesium, Structural Genomics, Center for Structural Genomics of Infectious Diseases, CSGID
Deposited on 2009-08-03, released 2009-08-11
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-11-01, with a file datestamp of 2017-10-27.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
    Species: Yersinia pestis [TaxId:214092]
    Gene: kdsC, NP_407035, y0150, YPO3578, YP_3833
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3ij5a_
  • Chain 'B':
    Compound: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
    Species: Yersinia pestis [TaxId:214092]
    Gene: kdsC, NP_407035, y0150, YPO3578, YP_3833
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3ij5b_
  • Chain 'C':
    Compound: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
    Species: Yersinia pestis [TaxId:214092]
    Gene: kdsC, NP_407035, y0150, YPO3578, YP_3833
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3ij5c_
  • Chain 'D':
    Compound: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
    Species: Yersinia pestis [TaxId:214092]
    Gene: kdsC, NP_407035, y0150, YPO3578, YP_3833
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3ij5d_
  • Heterogens: CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3ij5A (A:)
mhhhhhhssgvdlgtenlyfqsnamsntayidtcygpvaddviqraanirllicdvdgvm
sdgliymgnqgeelkafnvrdgygirclitsdidvaiitgrraklledrantlgithlyq
gqsdklvayhellatlqcqpeqvayigddlidwpvmaqvglsvavadahplllpkahyvt
rikggrgavrevcdlillaqdklegatglsi

    Sequence, based on observed residues (ATOM records): (download) 
    >3ij5A (A:)
ntayidtcygpvaddviqraanirllicdvdgvmsdgliymgnqgeelkafnvrdgygir
clitsdidvaiitgrraklledrantlgithlyqgqsdklvayhellatlqcqpeqvayi
gddlidwpvmaqvglsvavadahplllpkahyvtrikggrgavrevcdlillaqdklega
tglsi

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3ij5B (B:)
mhhhhhhssgvdlgtenlyfqsnamsntayidtcygpvaddviqraanirllicdvdgvm
sdgliymgnqgeelkafnvrdgygirclitsdidvaiitgrraklledrantlgithlyq
gqsdklvayhellatlqcqpeqvayigddlidwpvmaqvglsvavadahplllpkahyvt
rikggrgavrevcdlillaqdklegatglsi

    Sequence, based on observed residues (ATOM records): (download) 
    >3ij5B (B:)
ntayidtcygpvaddviqraanirllicdvdgvmsdgliymgnqgeelkafnvrdgygir
clitsdidvaiitgrraklledrantlgithlyqgqsdklvayhellatlqcqpeqvayi
gddlidwpvmaqvglsvavadahplllpkahyvtrikggrgavrevcdlillaqdklega
tglsi

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3ij5C (C:)
mhhhhhhssgvdlgtenlyfqsnamsntayidtcygpvaddviqraanirllicdvdgvm
sdgliymgnqgeelkafnvrdgygirclitsdidvaiitgrraklledrantlgithlyq
gqsdklvayhellatlqcqpeqvayigddlidwpvmaqvglsvavadahplllpkahyvt
rikggrgavrevcdlillaqdklegatglsi

    Sequence, based on observed residues (ATOM records): (download) 
    >3ij5C (C:)
tayidtcygpvaddviqraanirllicdvdgvmsdgliymgnqgeelkafnvrdgygirc
litsdidvaiitgrraklledrantlgithlyqgqsdklvayhellatlqcqpeqvayig
ddlidwpvmaqvglsvavadahplllpkahyvtrikggrgavrevcdlillaqdklega

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3ij5D (D:)
mhhhhhhssgvdlgtenlyfqsnamsntayidtcygpvaddviqraanirllicdvdgvm
sdgliymgnqgeelkafnvrdgygirclitsdidvaiitgrraklledrantlgithlyq
gqsdklvayhellatlqcqpeqvayigddlidwpvmaqvglsvavadahplllpkahyvt
rikggrgavrevcdlillaqdklegatglsi

    Sequence, based on observed residues (ATOM records): (download) 
    >3ij5D (D:)
sntayidtcygpvaddviqraanirllicdvdgvmsdgliymgnqgeelkafnvrdgygi
rclitsdidvaiitgrraklledrantlgithlyqgqsdklvayhellatlqcqpeqvay
igddlidwpvmaqvglsvavadahplllpkahyvtrikggrgavrevcdlillaqdkleg
atg