SCOPe 2.04: Structural Classification of Proteins

PDB entry 3ifh

View 3ifh on RCSB PDB site
Description: Crystal structure of succinate-semialdehyde dehydrogenase from Burkholderia pseudomallei, part 2 of 2
Class: oxidoreductase
Keywords: NIAID, Infectious Disease, SSGCID, Seattle Structural Genomics Center for Infectious Disease, Non-crystallographic symmetry, NCS, Oxidoreductase
Deposited on 2009-07-24, released 2009-08-04
The last revision prior to the SCOPe 2.04 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.238
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

Chain '1':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.04: d3ifh1_
Chain '2':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.04: d3ifh2_
Chain '3':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.04: d3ifh3_
Chain '4':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.04: d3ifh4_
Chain '5':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.04: d3ifh5_
Chain '6':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.04: d3ifh6_
Chain 'Q':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.04: d3ifhq_
Chain 'R':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.04: d3ifhr_
Chain 'S':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.04: d3ifhs_
Chain 'T':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.04: d3ifht_
Chain 'U':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.04: d3ifhu_
Chain 'V':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.04: d3ifhv_
Chain 'W':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.04: d3ifhw_
Chain 'X':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.04: d3ifhx_
Chain 'Y':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.04: d3ifhy_
Chain 'Z':
Compound: Succinate-semialdehyde dehydrogenase (NADP+)
Species: Burkholderia pseudomallei [TaxId:320372]
Gene: gabD, BURPS1710b_2207
Database cross-references and differences (RAF-indexed):
- Uniprot Q3JS51 (4-483)
  - expression tag (2-3)
Domains in SCOPe 2.04: d3ifhz_
Heterogens: HOH

PDB Chain Sequences:

Chain '1':
Sequence, based on SEQRES records: (download)

>3ifh1 (1:)
gpgsmkdpsllrhqayiggewqaadsdatfevfdpatgeslgtvpkmgaaetaraieaaq
aawagwrmktakeraailrrwfdlviansddlaliltteqgkplaeakgeiayaasfiew
faeegkrvagdtlptpdankrivvvkepigvcaaitpwnfpaamiarkvgpalaagcpiv
vkpaestpfsalamaflaeragvpkgvlsvvigdpkaigteitsnpivrklsftgstavg
rllmaqsaptvkkltlelggnapfivfddadldaavegaiaskyrnngqtcvctnrffvh
ervydafadklaaavsklkvgrgtesgatlgplineaavkkveshiadalakgaslmtgg
krhalghgffeptvltgvkpdmdvakeetfgplaplfrfaseeelvrlandtefglaayl
ysrdigrvwrvaealeygmvgintglisnevapfggvkqsglgregshygiddyvvikyl
cvav